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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "TFBSTools" in publications use:'
type: software
license: GPL-2.0-only
title: 'TFBSTools: Software Package for Transcription Factor Binding Site (TFBS) Analysis'
version: 1.50.0
doi: 10.1093/bioinformatics/btw024
identifiers:
- type: doi
  value: 10.32614/CRAN.package.TFBSTools
abstract: TFBSTools is a package for the analysis and manipulation of transcription
  factor binding sites. It includes matrices conversion between Position Frequency
  Matirx (PFM), Position Weight Matirx (PWM) and Information Content Matrix (ICM).
  It can also scan putative TFBS from sequence/alignment, query JASPAR database and
  provides a wrapper of de novo motif discovery software.
authors:
- family-names: Tan
  given-names: Ge
  email: ge_tan@live.com
preferred-citation:
  type: article
  title: 'TFBSTools: an R/Bioconductor package for transcription factor binding site
    analysis'
  authors:
  - family-names: Tan
    given-names: Ge
    email: ge_tan@live.com
  - family-names: Lenhard
    given-names: Boris
  year: '2016'
  journal: Bioinformatics
  volume: '32'
  issue: '10'
  doi: 10.1093/bioinformatics/btw024
  url: http://bioinformatics.oxfordjournals.org/content/32/10/1555
  start: 1555-1556
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/ge11232002/TFBSTools
commit: 45fd53825d6528101f16cc09dee94df57c38274a
url: https://github.com/ge11232002/TFBSTools
date-released: '2025-07-22'
contact:
- family-names: Tan
  given-names: Ge
  email: ge_tan@live.com