Package: TumourMethData
Title: A Collection of DNA Methylation Datasets for Human Tumour
        Samples and Matching Normal Samples
Version: 1.10.0
Date: 2023-09-29
Authors@R: 
    person("Richard", "Heery", , "richardheery@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-8067-3114"))
Description: TumourMethData collects tumour methylation data from a
        variety of different tumour types (and also matching normal
        samples where available) and produced with different
        technologies (e.g. WGBS, RRBS and methylation arrays) and
        provides them as RangedSummarizedExperiments. This facilitates
        easy extraction of methylation data for regions of interest
        across different tumour types and studies.
License: Artistic-2.0
URL: https://github.com/richardheery/TumourMethData
BugReports: https://support.bioconductor.org/tag/TumourMethData
biocViews: ExperimentData, ExperimentHub, MethylSeqData, CancerData,
        Homo_sapiens_Data,
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Depends: R (>= 4.2), SummarizedExperiment
Imports: base, BSgenome.Hsapiens.UCSC.hg19, dplyr, ExperimentHub,
        ExperimentHubData, GenomicRanges, HDF5Array, knitr, methodical,
        methrix, openxlsx, R.utils, readr, rhdf5, rmarkdown, stringr,
        TCGAutils, tibble, usethis, xlsx
Suggests: ggplot2
VignetteBuilder: knitr
LazyData: false
Config/pak/sysreqs: cmake libfontconfig1-dev libfreetype6-dev
        libfribidi-dev git make libharfbuzz-dev default-jdk libbz2-dev
        libgit2-dev libicu-dev libjpeg-dev liblzma-dev libpng-dev
        libtiff-dev libuv1-dev libwebp-dev libxml2-dev libssl-dev
        libx11-dev xz-utils zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:37:04 UTC
RemoteUrl: https://github.com/bioc/TumourMethData
RemoteRef: RELEASE_3_23
RemoteSha: 8d85e558b76fd646e2ff9e7ef92a2a92b1088967
NeedsCompilation: no
Packaged: 2026-10-10 11:26:22 UTC; root
Author: Richard Heery [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-8067-3114>)
Maintainer: Richard Heery <richardheery@gmail.com>