Package: airway
Title: RangedSummarizedExperiment for RNA-Seq in airway smooth muscle
        cells, by Himes et al PLoS One 2014
Version: 1.32.0
Author: Michael Love
Maintainer: Michael Love <michaelisaiahlove@gmail.com>
Description: This package provides a RangedSummarizedExperiment object
        of read counts in genes for an RNA-Seq experiment on four human
        airway smooth muscle cell lines treated with dexamethasone.
        Details on the gene model and read counting procedure are
        provided in the package vignette. The citation for the
        experiment is: Himes BE, Jiang X, Wagner P, Hu R, Wang Q,
        Klanderman B, Whitaker RM, Duan Q, Lasky-Su J, Nikolos C,
        Jester W, Johnson M, Panettieri R Jr, Tantisira KG, Weiss ST,
        Lu Q. 'RNA-Seq Transcriptome Profiling Identifies CRISPLD2 as a
        Glucocorticoid Responsive Gene that Modulates Cytokine Function
        in Airway Smooth Muscle Cells.' PLoS One. 2014 Jun
        13;9(6):e99625. PMID: 24926665. GEO: GSE52778.
biocViews: ExperimentData, SequencingData, RNASeqData, GEO
License: LGPL
Depends: R (>= 3.5.0), SummarizedExperiment
Suggests: knitr, GEOquery, markdown
VignetteBuilder: knitr
Config/pak/sysreqs: zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:27:21 UTC
RemoteUrl: https://github.com/bioc/airway
RemoteRef: RELEASE_3_23
RemoteSha: deb0a4f516f75823fbb9db28cfdd9fe67f695974
NeedsCompilation: no
Packaged: 2026-10-10 11:06:45 UTC; root