# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "amplican" in publications use:'
type: software
license: GPL-3.0-only
title: 'amplican: Automated analysis of CRISPR experiments'
version: 1.34.0
doi: 10.1101/gr.244293.118
identifiers:
- type: doi
  value: 10.32614/CRAN.package.amplican
abstract: '`amplican` performs alignment of the amplicon reads, normalizes gathered
  data, calculates multiple statistics (e.g. cut rates, frameshifts) and presents
  results in form of aggregated reports. Data and statistics can be broken down by
  experiments, barcodes, user defined groups, guides and amplicons allowing for quick
  identification of potential problems.'
authors:
- family-names: Labun
  given-names: Kornel
  email: kornel.labun@gmail.com
- family-names: Valen
  given-names: Eivind
  email: eivind.valen@gmail.com
preferred-citation:
  type: article
  title: Accurate analysis of genuine CRISPR editing events with ampliCan
  authors:
  - family-names: Labun
    given-names: Kornel
    email: kornel.labun@gmail.com
  - family-names: Guo
    given-names: Xiaoge
  - family-names: Chavez
    given-names: Alejandro
  - family-names: Church
    given-names: George
  - family-names: Gagnon
    given-names: James A
  - family-names: Valen
    given-names: Eivind
    email: eivind.valen@gmail.com
  journal: Genome Res
  year: '2019'
  doi: 10.1101/gr.244293.118
  url: https://genome.cshlp.org/content/early/2019/03/08/gr.244293.118.abstract
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/valenlab/amplican
commit: 8323cb7ce7f58f748d4dcbd15661a9898d7e464a
url: https://github.com/valenlab/amplican
date-released: '2026-04-28'
contact:
- family-names: Valen
  given-names: Eivind
  email: eivind.valen@gmail.com