{ "_id": "6aca1d04fe5cc25786e84cbb", "Package": "ARRmData", "Version": "1.48.0", "Title": "Example dataset for normalization of Illumina 450k Methylation\ndata", "Description": "Raw Beta values from 36 samples across 3 groups from\nIllumina 450k methylation arrays", "Author": "Jean-Philippe Fortin, Celia M.T. Greenwood, Aurelie Labbe", "Maintainer": "Jean-Philippe Fortin ", "License": "Artistic-2.0", "biocViews": "ExperimentData, MethylationArrayData", "Repository": "Bioconductor 3.23", "Date/Publication": "2026-04-28 12:25:25 UTC", "RemoteUrl": "https://github.com/bioc/ARRmData", "RemoteRef": "RELEASE_3_23", "RemoteSha": "d445c3e15d978c29d9d3f58cb7e206916ea6949f", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-10 11:04:16 UTC", "User": "root" }, "_user": "bioc-release", "_type": "src", "_file": "ARRmData_1.48.0.tar.gz", "_fileid": "https://r2.ropensci.org/abc178948064e025619378800937c53f17cf86a62435c867c1dcfba57d55352c", "_filesize": 59342994, "_sha256": "abc178948064e025619378800937c53f17cf86a62435c867c1dcfba57d55352c", "_expires": "2027-01-18T11:09:51.000Z", "_created": "2026-10-10T11:04:16.000Z", "_published": "2026-10-10T11:09:55.865Z", "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38046919446", "_status": "success", "_host": "GitHub-Actions", "_bioccheck": { "error": 2, "warning": 1, "note": 7 }, "_upstream": "https://github.com/bioc/ARRmData", "_commit": { "id": "d445c3e15d978c29d9d3f58cb7e206916ea6949f", "author": "lshep ", "committer": "lshep ", "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n", "time": 1777379125 }, "_maintainer": { "name": "Jean-Philippe Fortin", "email": "jfortin@jhsph.edu" }, "_distro": "resolute", "_jobs": [ { "job": 114199177102, "time": 116, "config": "bioc-checks", "r": "4.6.1", "check": "ERROR", "artifact": "11668166505" }, { "job": 114199177107, "time": 148, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "11667846772" }, { "job": 114199177117, "time": 160, "config": "linux-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "11668895168" }, { "job": 114198245371, "time": 320, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11668625174" } ], "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.0.0", "role": "Depends" } ], "_owner": "bioc", "_selfowned": false, "_usedby": 1, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 1 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.49.0", "bioc": "3.24", "repository": "data/experiment" }, { "branch": "release", "version": "1.48.0", "bioc": "3.23", "repository": "data/experiment" } ], "_topics": [ "experimentdata", "methylationarraydata", "datapkg" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 476, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_searchresults": 1, "_datapkg": true, "_rbuild": "4.6.1", "_assets": [ "extra/ARRmData.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf" ], "_cranurl": false, "_exports": [], "_datasets": [ { "name": "betaMatrix", "title": "Example of a matrix of Beta values from the Illumina 450k array", "object": "betaMatrix", "file": "betaMatrix.rda", "class": [ "data.frame" ], "fields": [ "5621146023_R01C01", "5621146023_R01C02", "5621146023_R02C01", "5621146023_R02C02", "5621146023_R03C01", "5621146023_R03C02", "5621146023_R04C01", "5621146023_R04C02", "5621146023_R05C01", "5621146023_R05C02", "5621146023_R06C01", "5621146023_R06C02", "5621146024_R01C01", "5621146024_R01C02", "5621146024_R02C01", "5621146024_R02C02", "5621146024_R03C01", "5621146024_R03C02", "5621146024_R04C01", "5621146024_R04C02", "5621146024_R05C01", "5621146024_R05C02", "5621146024_R06C01", "5621146024_R06C02", "5621146025_R01C01", "5621146025_R01C02", "5621146025_R02C01", "5621146025_R02C02", "5621146025_R03C01", "5621146025_R03C02", "5621146025_R04C01", "5621146025_R04C02", "5621146025_R05C01", "5621146025_R05C02", "5621146025_R06C01", "5621146025_R06C02" ], "rows": 485577, "table": true, "tojson": true }, { "name": "greenControlMatrix", "title": "Example of a matrix containing the green negative control probes from the Illumina 450k array", "object": "greenControlMatrix", "file": "greenControlMatrix.rda", "class": [ "data.frame" ], "fields": [ "5621146023_R01C01", "5621146023_R01C02", "5621146023_R02C01", "5621146023_R02C02", "5621146023_R03C01", "5621146023_R03C02", "5621146023_R04C01", "5621146023_R04C02", "5621146023_R05C01", "5621146023_R05C02", "5621146023_R06C01", "5621146023_R06C02", "5621146024_R01C01", "5621146024_R01C02", "5621146024_R02C01", "5621146024_R02C02", "5621146024_R03C01", "5621146024_R03C02", "5621146024_R04C01", "5621146024_R04C02", "5621146024_R05C01", "5621146024_R05C02", "5621146024_R06C01", "5621146024_R06C02", "5621146025_R01C01", "5621146025_R01C02", "5621146025_R02C01", "5621146025_R02C02", "5621146025_R03C01", "5621146025_R03C02", "5621146025_R04C01", "5621146025_R04C02", "5621146025_R05C01", "5621146025_R05C02", "5621146025_R06C01", "5621146025_R06C02" ], "rows": 600, "table": true, "tojson": true }, { "name": "redControlMatrix", "title": "Example of a matrix containing the red negative control probes from the Illumina 450k array", "object": "redControlMatrix", "file": "redControlMatrix.rda", "class": [ "data.frame" ], "fields": [ "5621146023_R01C01", "5621146023_R01C02", "5621146023_R02C01", "5621146023_R02C02", "5621146023_R03C01", "5621146023_R03C02", "5621146023_R04C01", "5621146023_R04C02", "5621146023_R05C01", "5621146023_R05C02", "5621146023_R06C01", "5621146023_R06C02", "5621146024_R01C01", "5621146024_R01C02", "5621146024_R02C01", "5621146024_R02C02", "5621146024_R03C01", "5621146024_R03C02", "5621146024_R04C01", "5621146024_R04C02", "5621146024_R05C01", "5621146024_R05C02", "5621146024_R06C01", "5621146024_R06C02", "5621146025_R01C01", "5621146025_R01C02", "5621146025_R02C01", "5621146025_R02C02", "5621146025_R03C01", "5621146025_R03C02", "5621146025_R04C01", "5621146025_R04C02", "5621146025_R05C01", "5621146025_R05C02", "5621146025_R06C01", "5621146025_R06C02" ], "rows": 600, "table": true, "tojson": true }, { "name": "sampleNames", "title": "An example of sample names for the Illumina 450k array", "object": "sampleNames", "file": "sampleNames.rda", "class": [ "data.frame" ], "fields": [ "sampleNames" ], "rows": 36, "table": true, "tojson": true } ], "_help": [ { "page": "betaMatrix", "title": "Example of a matrix of Beta values from the Illumina 450k array", "topics": [ "betaMatrix" ] }, { "page": "greenControlMatrix", "title": "Example of a matrix containing the green negative control probes from the Illumina 450k array", "topics": [ "greenControlMatrix" ] }, { "page": "redControlMatrix", "title": "Example of a matrix containing the red negative control probes from the Illumina 450k array", "topics": [ "redControlMatrix" ] }, { "page": "sampleNames", "title": "An example of sample names for the Illumina 450k array", "topics": [ "sampleNames" ] } ], "_rundeps": [], "_score": 2.778151250383644, "_indexed": false, "_nocasepkg": "arrmdata", "_universes": [ "bioc-release" ], "_indexurl": "https://bioc.r-universe.dev/ARRmData", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.48.0", "date": "2026-10-10T11:08:50.000Z", "distro": "resolute", "commit": "d445c3e15d978c29d9d3f58cb7e206916ea6949f", "fileid": "https://r2.ropensci.org/12f8494a2caba920d86a350453380521ee90f58c4384e726a4f66669f1854738", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38046919446" }, { "r": "4.6.1", "os": "linux", "version": "1.48.0", "date": "2026-10-10T11:09:07.000Z", "distro": "resolute", "commit": "d445c3e15d978c29d9d3f58cb7e206916ea6949f", "fileid": "https://r2.ropensci.org/93bc757263ce19f7ee3b8ccb522ff6a6aae9a31a83de04472a5e7ee2f6c736ba", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38046919446" } ] }