{
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  "Package": "AnnotationHub",
  "Type": "Package",
  "Title": "Client to access AnnotationHub resources",
  "Version": "4.2.1",
  "Authors@R": "c(person(\"Bioconductor Package\", \"Maintainer\", email=\"maintainer@bioconductor.org\",\nrole=\"cre\"),\nperson(\"Martin\", \"Morgan\", role=\"aut\"),\nperson(\"Marc\", \"Carlson\", role=\"ctb\"),\nperson(\"Dan\", \"Tenenbaum\", role=\"ctb\"),\nperson(\"Sonali\", \"Arora\", role=\"ctb\"),\nperson(\"Valerie\", \"Oberchain\", role=\"ctb\"),\nperson(\"Kayla\", \"Morrell\", role=\"ctb\"),\nperson(\"Lori\", \"Shepherd\", role=\"aut\"))",
  "biocViews": "Infrastructure, DataImport, GUI, ThirdPartyClient",
  "Description": "This package provides a client for the Bioconductor\nAnnotationHub web resource. The AnnotationHub web resource\nprovides a central location where genomic files (e.g., VCF,\nbed, wig) and other resources from standard locations (e.g.,\nUCSC, Ensembl) can be discovered. The resource includes\nmetadata about each resource, e.g., a textual description,\ntags, and date of modification. The client creates and manages\na local cache of files retrieved by the user, helping with\nquick and reproducible access.",
  "License": "Artistic-2.0",
  "Collate": "AnnotationHubOption.R AllGenerics.R Hub-class.R db-utils.R\nAnnotationHub-class.R AnnotationHubResource-class.R\nBEDResource-class.R ProteomicsResource-class.R\nEpigenomeResource-class.R EnsDbResource-class.R utilities.R\nsql-utils.R Hub-utils.R cache-utils.R zzz.R",
  "VignetteBuilder": "knitr",
  "BugReports": "https://github.com/Bioconductor/AnnotationHub/issues",
  "NeedsCompilation": "yes",
  "RoxygenNote": "7.3.2",
  "Config/pak/sysreqs": "libicu-dev libpng-dev libssl-dev zlib1g-dev",
  "Repository": "https://bioc-release.r-universe.dev",
  "Date/Publication": "2026-06-15 17:53:33 UTC",
  "RemoteUrl": "https://github.com/bioc/AnnotationHub",
  "RemoteRef": "RELEASE_3_23",
  "RemoteSha": "e08bf460ea5764df8ed719eb1fb538cd2d9de9e9",
  "Packaged": {
    "Date": "2026-06-15 22:26:47 UTC",
    "User": "root"
  },
  "Author": "Bioconductor Package Maintainer [cre],\nMartin Morgan [aut],\nMarc Carlson [ctb],\nDan Tenenbaum [ctb],\nSonali Arora [ctb],\nValerie Oberchain [ctb],\nKayla Morrell [ctb],\nLori Shepherd [aut]",
  "Maintainer": "Bioconductor Package Maintainer <maintainer@bioconductor.org>",
  "MD5sum": "63b16b9bdb741f6abe7f2fe538926290",
  "_user": "bioc-release",
  "_type": "src",
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  "_created": "2026-06-15T22:26:47.000Z",
  "_published": "2026-06-15T22:35:05.656Z",
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    "email": "maintainer@bioconductor.org",
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    },
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    }
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    "dataimport",
    "gui",
    "thirdpartyclient",
    "core-package",
    "u24ca289073"
  ],
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  "_contributors": [
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    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
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    "source": "https://www.bioconductor.org/packages/stats/bioc/AnnotationHub"
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  "_devurl": "https://github.com/bioconductor/annotationhub",
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  "_rbuild": "4.6.0",
  "_assets": [
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    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/bioconductor/annotationhub",
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
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    ".DollarNames.Hub",
    ".getProxyValue",
    ".Hub",
    ".hub_option_key",
    "AnnotationHub",
    "as.list",
    "as.list.Hub",
    "cache",
    "cache<-",
    "convertHub",
    "dbconn",
    "dbfile",
    "DispatchClassList",
    "fileName",
    "getAnnotationHubOption",
    "getHub",
    "getInfoOnIds",
    "hubCache",
    "hubDate",
    "hubUrl",
    "isLocalHub",
    "isLocalHub<-",
    "listResources",
    "loadResources",
    "mcols",
    "package",
    "possibleDates",
    "query",
    "recordStatus",
    "refreshHub",
    "removeCache",
    "removeResources",
    "setAnnotationHubOption",
    "show",
    "snapshotDate",
    "snapshotDate<-",
    "subset"
  ],
  "_help": [
    {
      "page": "AnnotationHub-package",
      "title": "Light-weight AnnotationHub 3.0 Client",
      "topics": [
        "AnnotationHub-package"
      ]
    },
    {
      "page": "AnnotationHub-class",
      "title": "AnnotationHub objects and their related methods and functions",
      "topics": [
        "$,Hub-method",
        ".db_close",
        ".Hub",
        "AnnotationHub",
        "AnnotationHub-class",
        "as.list,Hub-method",
        "as.list.Hub",
        "c,Hub-method",
        "cache",
        "cache,AnnotationHub-method",
        "cache,Hub-method",
        "cache<-",
        "cache<-,Hub-method",
        "class:AnnotationHub",
        "class:Hub",
        "dbconn,Hub-method",
        "dbfile,Hub-method",
        "fileName,Hub-method",
        "Hub-class",
        "hubCache",
        "hubCache,Hub-method",
        "hubDate",
        "hubDate,Hub-method",
        "hubUrl",
        "hubUrl,Hub-method",
        "isLocalHub",
        "isLocalHub,Hub-method",
        "isLocalHub<-",
        "isLocalHub<-,Hub-method",
        "length,Hub-method",
        "mcols,Hub-method",
        "names,Hub-method",
        "package",
        "package,Hub-method",
        "possibleDates",
        "query",
        "query,Hub-method",
        "recordStatus",
        "recordStatus,Hub-method",
        "refreshHub",
        "removeCache",
        "removeResources",
        "removeResources,character-method",
        "removeResources,missing-method",
        "show,AnnotationHubResource-method",
        "show,Hub-method",
        "snapshotDate",
        "snapshotDate,Hub-method",
        "snapshotDate<-",
        "snapshotDate<-,Hub-method",
        "subset,Hub-method",
        "[,Hub,character,missing-method",
        "[,Hub,logical,missing-method",
        "[,Hub,numeric,missing-method",
        "[<-,Hub,character,missing,Hub-method",
        "[<-,Hub,logical,missing,Hub-method",
        "[<-,Hub,numeric,missing,Hub-method",
        "[[,Hub,character,missing-method",
        "[[,Hub,numeric,missing-method"
      ]
    },
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      "title": "Convert old Hub to new Hub structure",
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        "convertHub"
      ]
    },
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      "page": "getAnnotationHubOption",
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        "setAnnotationHubOption"
      ]
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        "getInfoOnIds,character-method",
        "getInfoOnIds,missing-method",
        "getInfoOnIds,numeric-method",
        "Hub-utils"
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        "listResources",
        "loadResources",
        "utilities"
      ]
    },
    {
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      "topics": [
        "DispatchClassList",
        "utils"
      ]
    }
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