{ "_id": "6a1bda291d7bb097a0a16dce", "Package": "CoCiteStats", "Title": "Different test statistics based on co-citation.", "Version": "1.84.0", "Author": "B. Ding and R. Gentleman", "Description": "A collection of software tools for dealing with\nco-citation data.", "Maintainer": "Bioconductor Package Maintainer\n", "License": "CPL", "biocViews": "Software", "Config/pak/sysreqs": "libpng-dev libssl-dev zlib1g-dev", "Repository": "https://bioc-release.r-universe.dev", "Date/Publication": "2026-04-28 12:30:54 UTC", "RemoteUrl": "https://github.com/bioc/CoCiteStats", "RemoteRef": "RELEASE_3_23", "RemoteSha": "fcaa7a4590b6d437b49acac254a8cec54ab50f15", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-31 06:29:03 UTC", "User": "root" }, "MD5sum": "84fcc9311e4ef8020a04ceb1ed36ef4a", "_user": "bioc-release", "_type": "src", "_file": "CoCiteStats_1.84.0.tar.gz", "_fileid": "a90fae8b9094598f9f915684058968fedb969a1e692f08f4ef219f53c5a71291", "_filesize": 118378, "_sha256": "a90fae8b9094598f9f915684058968fedb969a1e692f08f4ef219f53c5a71291", "_created": "2026-05-31T06:29:03.000Z", "_published": "2026-05-31T06:50:16.989Z", "_jobs": [ { "job": 78705590507, "time": 162, "config": "bioc-checks", "r": "4.6.0", "check": "ERROR", "artifact": "7314445991" }, { "job": 78705590549, "time": 354, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "7314467710" }, { "job": 78705590548, "time": 382, "config": "linux-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "7314471081" }, { "job": 78705590516, "time": 201, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "7314551269" }, { "job": 78705590518, "time": 252, "config": "macos-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "7314559908" }, { "job": 78705408198, "time": 208, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7314428602" }, { "job": 78705590503, "time": 127, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7314442432" }, { "job": 78705590537, "time": 259, "config": "windows-devel", "r": "4.7.0", "check": "NOTE", "artifact": "7314457241" }, { "job": 78705590556, "time": 238, "config": "windows-oldrel", "r": "4.5.3", "check": "NOTE", "artifact": "7314454792" }, { "job": 78705590554, "time": 236, "config": "windows-release", "r": "4.6.0", "check": "NOTE", "artifact": "7314454757" } ], "_bioccheck": { "error": 3, "warning": 0, "note": 10 }, "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26705327438", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/bioc/CoCiteStats", "_commit": { "id": "fcaa7a4590b6d437b49acac254a8cec54ab50f15", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n", "time": 1777379454 }, "_maintainer": { "name": "Bioconductor Package Maintainer", "email": "maintainer@bioconductor.org", "login": "bioconductor-bot", "description": "", "uuid": 11681645 }, "_distro": "noble", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.0", "role": "Depends" }, { "package": "org.Hs.eg.db", "role": "Depends" }, { "package": "AnnotationDbi", "role": "Imports" } ], "_owner": "bioc", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 1 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.85.0", "bioc": "3.24" }, { "branch": "release", "version": "1.84.0", "bioc": "3.23" } ], "_topics": [ "software" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 419, "source": "https://www.bioconductor.org/packages/stats/bioc/CoCiteStats" }, "_mentions": 2, "_searchresults": 0, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/CoCiteStats.html", "extra/contents.json", "manual.pdf" ], "_realowner": "bioc", "_cranurl": false, "_exports": [ "actorAdjTable", "gene.gene.statistic", "gene.geneslist.sig", "gene.geneslist.statistic", "paperLen", "twowayTable", "twTStats" ], "_help": [ { "page": "actorAdjTable", "title": "Compute actor size adjustment on a two way table", "topics": [ "actorAdjTable" ] }, { "page": "gene.gene.statistic", "title": "Compute gene-gene statistics", "topics": [ "gene.gene.statistic" ] }, { "page": "gene.geneslist.sig", "title": "Compute 3 two-way table statistics and p-values, with 4 different adjustments, for PubMed co-citation", "topics": [ "gene.geneslist.sig" ] }, { "page": "gene.geneslist.statistic", "title": "A function to compute association measures between a gene of interest and a list of genes.", "topics": [ "gene.geneslist.statistic" ] }, { "page": "paperLen", "title": "Find the number of papers cited", "topics": [ "paperLen" ] }, { "page": "twowayTable", "title": "Compute a two way co-citation table for 2 genes.", "topics": [ "twowayTable" ] }, { "page": "twTStats", "title": "Computes 3 two way table statistics.", "topics": [ "twTStats" ] } ], "_rundeps": [ "AnnotationDbi", "askpass", "Biobase", "BiocGenerics", "Biostrings", "bit", "bit64", "blob", "cachem", "cli", "cpp11", "crayon", "curl", "DBI", "fastmap", "generics", "glue", "httr", "IRanges", "jsonlite", "KEGGREST", "lifecycle", "memoise", "mime", "openssl", "org.Hs.eg.db", "pkgconfig", "png", "R6", "rlang", "RSQLite", "S4Vectors", "Seqinfo", "sys", "vctrs", "XVector" ], "_score": 2.6020599913279625, "_indexed": false, "_nocasepkg": "cocitestats", "_universes": [ "bioc-release" ], "_indexurl": "https://bioc.r-universe.dev/CoCiteStats", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.84.0", "date": "2026-05-31T06:31:59.000Z", "distro": "noble", "commit": "fcaa7a4590b6d437b49acac254a8cec54ab50f15", "fileid": "f5100dc39d69092dac7bba412f72ca51c13cd1e9e6bf85106b08258f00a40139", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26705327438" }, { "r": "4.6.0", "os": "linux", "version": "1.84.0", "date": "2026-05-31T06:32:33.000Z", "distro": "noble", "commit": "fcaa7a4590b6d437b49acac254a8cec54ab50f15", "fileid": "92b8700968946fe3e1fcb58804a5775d9ee533e41f94c3fddc96f0b6220295cb", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26705327438" }, { "r": "4.5.3", "os": "mac", "version": "1.84.0", "date": "2026-05-31T06:46:31.000Z", "commit": "fcaa7a4590b6d437b49acac254a8cec54ab50f15", "fileid": "a364a0fa9c8d2ddc8b28c255f6b365f7d5e8e558d597ddb278cadcd379c83f80", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26705327438" }, { "r": "4.6.0", "os": "mac", "version": "1.84.0", "date": "2026-05-31T06:47:23.000Z", "commit": "fcaa7a4590b6d437b49acac254a8cec54ab50f15", "fileid": "c69ab4d810df4913e4660d70f7d1d2adc8aadf9f86ac1feca76bfc9a17ff61dc", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26705327438" }, { "r": "4.6.0", "os": "wasm", "version": "1.84.0", "date": "2026-05-31T06:31:32.000Z", "commit": "fcaa7a4590b6d437b49acac254a8cec54ab50f15", "fileid": "6646b4d029dc034036772f915eb5373627ce1573a6f8cd6d627db31335ce7a27", "status": "success", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26705327438" }, { "r": "4.7.0", "os": "win", "version": "1.84.0", "date": "2026-05-31T06:30:56.000Z", "commit": "fcaa7a4590b6d437b49acac254a8cec54ab50f15", "fileid": "3a65632443473aee56457765a3fef254e5ea17ae482a2a7a5e27ef9b2f71cc13", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26705327438" }, { "r": "4.5.3", "os": "win", "version": "1.84.0", "date": "2026-05-31T06:30:48.000Z", "commit": "fcaa7a4590b6d437b49acac254a8cec54ab50f15", "fileid": "65ff3d0a37c4837a89145bbc0299128894107cd09161518a9b91b02fa5c0aa71", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26705327438" }, { "r": "4.6.0", "os": "win", "version": "1.84.0", "date": "2026-05-31T06:30:40.000Z", "commit": "fcaa7a4590b6d437b49acac254a8cec54ab50f15", "fileid": "c81886d9b2b570393b5c173852089d782a41e8b4f8f3bf1861b07205918cf4ef", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26705327438" } ] }