{
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  "Package": "LiquidAssociation",
  "Type": "Package",
  "Title": "LiquidAssociation",
  "Version": "1.66.0",
  "Date": "2009-10-07",
  "Author": "Yen-Yi Ho <yho@jhsph.edu>",
  "Maintainer": "Yen-Yi Ho <yho@jhsph.edu>",
  "Description": "The package contains functions for calculate direct and\nmodel-based estimators for liquid association. It also provides\nfunctions for testing the existence of liquid association given\na gene triplet data.",
  "License": "GPL (>=3)",
  "LazyLoad": "yes",
  "biocViews": "Pathways, GeneExpression, CellBiology, Genetics, Network,\nTimeCourse",
  "Config/pak/sysreqs": "libicu-dev libpng-dev libssl-dev zlib1g-dev",
  "Repository": "https://bioc-release.r-universe.dev",
  "Date/Publication": "2026-04-28 12:34:19 UTC",
  "RemoteUrl": "https://github.com/bioc/LiquidAssociation",
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  "NeedsCompilation": "no",
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    "User": "root"
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  "MD5sum": "2125f1d9f20bfcb5dcb58340ae664335",
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    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
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    "email": "yho@jhsph.edu"
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  "_selfowned": false,
  "_usedby": 1,
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    "geneexpression",
    "cellbiology",
    "genetics",
    "network",
    "timecourse"
  ],
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    "type": "organization",
    "name": "Bioconductor",
    "followers": 440,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
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    "extra/citation.html",
    "extra/citation.json",
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  "_realowner": "bioc",
  "_cranurl": false,
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    "CNM.simple",
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    "getsGLA",
    "getsLA",
    "GLA",
    "LA",
    "permute3.se",
    "plotGLA",
    "print",
    "qqnorm2",
    "stand"
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  "_help": [
    {
      "page": "LiquidAssociation-package",
      "title": "Liquid Associaiton Package",
      "topics": [
        "LiquidAssociation-package",
        "LiquidAssociation"
      ]
    },
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      "page": "CNM-class",
      "title": "Class CNM",
      "topics": [
        "CNM-class",
        "print,CNM-method",
        "show,CNM-method"
      ]
    },
    {
      "page": "CNM.full-methods",
      "title": "The function fits a full conditional normal model (CNM)",
      "topics": [
        "CNM.full",
        "CNM.full,eSet-method",
        "CNM.full,matrix-method",
        "CNM.full-methods"
      ]
    },
    {
      "page": "CNM.simple-methods",
      "title": "The function fits a reduced conditional normal model (CNM)",
      "topics": [
        "CNM.simple",
        "CNM.simple,eSet-method",
        "CNM.simple,matrix-method",
        "CNM.simple-methods"
      ]
    },
    {
      "page": "getsGLA-methods",
      "title": "Function to calculate the sGLA test statistic for a given triplet data",
      "topics": [
        "getsGLA",
        "getsGLA,eSet-method",
        "getsGLA,matrix-method",
        "getsGLA-methods"
      ]
    },
    {
      "page": "getsLA-methods",
      "title": "Function to calculate the sLA test statistic for a given triplet data",
      "topics": [
        "getsLA",
        "getsLA,eSet-method",
        "getsLA,matrix-method",
        "getsLA-methods"
      ]
    },
    {
      "page": "GLA-methods",
      "title": "Function to calculate GLA estimate",
      "topics": [
        "GLA",
        "GLA,eSet-method",
        "GLA,matrix-method",
        "GLA-methods"
      ]
    },
    {
      "page": "LA-methods",
      "title": "Function to calculate LA estimate",
      "topics": [
        "LA",
        "LA,eSet-method",
        "LA,matrix-method",
        "LA-methods"
      ]
    },
    {
      "page": "plotGLA-methods",
      "title": "The function plots scatter plots of two variables conditioning on the value of a third variable.",
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        "plotGLA,eSet-method",
        "plotGLA,matrix-method",
        "plotGLA-methods"
      ]
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      "source": "LiquidAssociation.Rnw",
      "filename": "LiquidAssociation.pdf",
      "title": "LiquidAssociation Vignette",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2013-11-01 20:10:49",
      "modified": "2013-11-01 20:10:49",
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