{ "_id": "6a2facfa3efcd9bda43278ca", "Package": "PSMatch", "Title": "Handling and Managing Peptide Spectrum Matches", "Version": "1.16.0", "Authors@R": "c(person(given = \"Laurent\", family = \"Gatto\",\nemail = \"laurent.gatto@uclouvain.be\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-1520-2268\")),\nperson(given = \"Johannes\", family = \"Rainer\",\nemail = \"Johannes.Rainer@eurac.edu\",\nrole = \"aut\",\ncomment = c(ORCID = \"0000-0002-6977-7147\")),\nperson(given = \"Sebastian\", family = \"Gibb\",\nemail = \"mail@sebastiangibb.de\",\nrole = \"aut\",\ncomment = c(ORCID = \"0000-0001-7406-4443\")),\nperson(given = \"Samuel\", family = \"Wieczorek\",\nemail = \"samuel.wieczorek@cea.fr\",\nrole = \"ctb\"),\nperson(given = \"Thomas\", family = \"Burger\",\nemail = \"thomas.burger@cea.fr\",\nrole = \"ctb\"),\nperson(given = \"Guillaume\", family = \"Deflandre\",\nemail = \"guillaume.deflandre@uclouvain.be\",\nrole = \"ctb\",\ncomment = c(ORCID = \"0009-0008-1257-2416\")))", "Description": "The PSMatch package helps proteomics practitioners to\nload, handle and manage Peptide Spectrum Matches. It provides\nfunctions to model peptide-protein relations as adjacency\nmatrices and connected components, visualise these as graphs\nand make informed decision about shared peptide filtering. The\npackage also provides functions to calculate and visualise MS2\nfragment ions.", "License": "Artistic-2.0", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr", "BugReports": "https://github.com/RforMassSpectrometry/PSM/issues", "URL": "https://github.com/RforMassSpectrometry/PSM", "biocViews": "Infrastructure, Proteomics, MassSpectrometry", "Config/pak/sysreqs": "cmake libglpk-dev make libicu-dev libuv1-dev\nlibxml2-dev libssl-dev zlib1g-dev", "Repository": "https://bioc-release.r-universe.dev", "Date/Publication": "2026-04-28 12:57:58 UTC", "RemoteUrl": "https://github.com/bioc/PSMatch", "RemoteRef": "RELEASE_3_23", "RemoteSha": "ba337122c6bf31d075ac69eacd4d43b095e30be3", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-15 07:33:24 UTC", "User": "root" }, "Author": "Laurent Gatto [aut, cre] (ORCID:\n),\nJohannes Rainer [aut] (ORCID: ),\nSebastian Gibb [aut] (ORCID: ),\nSamuel Wieczorek [ctb],\nThomas Burger 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