{
  "_id": "6aaa40f9ea78b3e62eac9c53",
  "Package": "RSeqAn",
  "Type": "Package",
  "Title": "R SeqAn",
  "Version": "1.32.0",
  "Authors@R": "person(\"August\", \"Guang\", role=c(\"aut\",\"cre\"), email = \"august.guang@gmail.com\")",
  "Description": "Headers and some wrapper functions from the SeqAn C++\nlibrary for ease of usage in R.",
  "License": "BSD_3_clause + file LICENSE",
  "BugReports": "https://github.com/compbiocore/RSeqAn/issues",
  "VignetteBuilder": "knitr",
  "biocViews": "Infrastructure, Software",
  "RoxygenNote": "6.1.0",
  "Repository": "Bioconductor 3.23",
  "Date/Publication": "2026-04-28 12:47:47 UTC",
  "RemoteUrl": "https://github.com/bioc/RSeqAn",
  "RemoteRef": "RELEASE_3_23",
  "RemoteSha": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-09-16 06:45:55 UTC",
    "User": "root"
  },
  "Author": "August Guang [aut, cre]",
  "Maintainer": "August Guang <august.guang@gmail.com>",
  "_user": "bioc-release",
  "_type": "src",
  "_file": "RSeqAn_1.32.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/e6926d3743b26c403cdb3b44a1d002d53614a6e5ac1b404da664b5324e608750",
  "_filesize": 1790650,
  "_sha256": "e6926d3743b26c403cdb3b44a1d002d53614a6e5ac1b404da664b5324e608750",
  "_expires": "2026-12-25T07:10:47.000Z",
  "_created": "2026-09-16T06:45:55.000Z",
  "_published": "2026-09-16T07:10:49.172Z",
  "_bioccheck": {
    "error": 1,
    "warning": 1,
    "note": 6
  },
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682",
  "_status": "success",
  "_upstream": "https://github.com/bioc/RSeqAn",
  "_commit": {
    "id": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n",
    "time": 1777380467
  },
  "_maintainer": {
    "name": "August Guang",
    "email": "august.guang@gmail.com",
    "login": "aguang",
    "description": "PhD in Applied Mathematics and Computational Biology. Lead Genomics Data Scientist at the Center for Computation and Visualization at Brown University.",
    "uuid": 1276891
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 104693982922,
      "time": 151,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "10434485114"
    },
    {
      "job": 104693983010,
      "time": 138,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "10433769097"
    },
    {
      "job": 104693982951,
      "time": 157,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "10433074510"
    },
    {
      "job": 104693982983,
      "time": 128,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "10433694252"
    },
    {
      "job": 104693982969,
      "time": 160,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "10434235524"
    },
    {
      "job": 104693983126,
      "time": 92,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "10434752248"
    },
    {
      "job": 104693982911,
      "time": 161,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "10434266341"
    },
    {
      "job": 104693982988,
      "time": 145,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "10434363499"
    },
    {
      "job": 104693982959,
      "time": 238,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "10433448835"
    },
    {
      "job": 104693275662,
      "time": 175,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10433758689"
    },
    {
      "job": 104693982954,
      "time": 121,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "10433094539"
    },
    {
      "job": 104693982934,
      "time": 218,
      "config": "windows-devel-arm64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "10433589707"
    },
    {
      "job": 104693983116,
      "time": 91,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "10434241008"
    },
    {
      "job": 104693982944,
      "time": 59,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "10433514584"
    },
    {
      "job": 104693982942,
      "time": 199,
      "config": "windows-release-arm64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "10433579693"
    },
    {
      "job": 104693983038,
      "time": 77,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "10434008003"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 1
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.33.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.32.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "infrastructure",
    "software",
    "cpp"
  ],
  "_stars": 3,
  "_contributors": [
    {
      "user": "aguang",
      "count": 79,
      "uuid": 1276891
    },
    {
      "user": "vobencha",
      "count": 2,
      "uuid": 2466173
    }
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 467,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 404,
    "source": "https://www.bioconductor.org/packages/stats/bioc/RSeqAn"
  },
  "_devurl": "https://github.com/compbiocore/rseqan",
  "_searchresults": 2,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "extra/RSeqAn.html",
    "LICENSE"
  ],
  "_homeurl": "https://github.com/compbiocore/rseqan",
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "containment_test"
  ],
  "_help": [
    {
      "page": "containment_test",
      "title": "containment test",
      "topics": [
        "containment_test"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/RSeqAn/raw/RELEASE_3_23/README.md",
  "_rundeps": [
    "Rcpp"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "first_example.Rmd",
      "filename": "first_example.html",
      "title": "Introduction to Using RSeqAn",
      "author": "August Guang",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Template functions and template classes",
        "A more detailed look at the program"
      ],
      "created": "2018-02-19 16:00:55",
      "modified": "2018-04-11 15:25:36",
      "commits": 7
    }
  ],
  "_score": 4.477121254719663,
  "_indexed": false,
  "_nocasepkg": "rseqan",
  "_universes": [
    "bioc-release"
  ],
  "_indexurl": "https://bioc.r-universe.dev/RSeqAn",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.32.0",
      "date": "2026-09-16T06:48:21.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/8fe5dd2d059aa5a582816b9b847c198dfda2e0b0bb1df3a9d948329ee3d762c3",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.32.0",
      "date": "2026-09-16T06:48:32.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/a54d03897726c85c1da68fa710189a80e57d158e42a8546bffd74811f66921bf",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.32.0",
      "date": "2026-09-16T06:48:15.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/7d9f122a213e017b1745e3f74405cb34fe177571f8db016e00c5d3cc37ce11ea",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.32.0",
      "date": "2026-09-16T06:48:40.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/950636d077f6a5da5a051271156554170168b41a2f17486946a38a7dfc6c953a",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.32.0",
      "date": "2026-09-16T07:10:07.000Z",
      "arch": "aarch64",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/4686edf3cf80c5e00ab995155b47621bd8d4c893c1db9ab1639db949ec4abf79",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.32.0",
      "date": "2026-09-16T06:50:22.000Z",
      "arch": "x86_64",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/793f4ce5eb51c422c21364e9d025da803d206017bd28df029fcba068a706db6c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.32.0",
      "date": "2026-09-16T07:09:16.000Z",
      "arch": "aarch64",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/694697b5a0523b4ffc0ff4794959e610578a71f8e17ff1de2e8d9b332322d4a2",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.32.0",
      "date": "2026-09-16T06:51:43.000Z",
      "arch": "x86_64",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/1f4b029bcc5330e247e3bc1dc78fd196b7e22fd2a468793d9769623270de9a44",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.32.0",
      "date": "2026-09-16T06:48:15.000Z",
      "arch": "emscripten",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/04151f8a3a93b8eef0d4fb9a17536ca4fcc9ab45ee6140d27faf5c29e330d40e",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.32.0",
      "date": "2026-09-16T06:47:25.000Z",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/e4d966074dcbc69f7136001e72fc64d27434fc51d333e65fd62765b18ee9924e",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.32.0",
      "date": "2026-09-16T06:47:02.000Z",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/d0ed354b849c22b8a0c0d2e65ab8e69eea9b7ab8a1efe00d19872f0b451b2d52",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.32.0",
      "date": "2026-09-16T06:47:13.000Z",
      "commit": "49dcd54d3f7c48fa52a4d0006d10ffc194760562",
      "fileid": "https://r2.ropensci.org/017fa0facfa65a676a51f5a35c1d91297f26ea75ec2623bca5e2b37e3107428d",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35064988682"
    }
  ]
}