{
  "_id": "6a1aee381d7bb097a09f5774",
  "Package": "RTCA",
  "Type": "Package",
  "Title": "Open-source toolkit to analyse data from xCELLigence System\n(RTCA)",
  "Version": "1.64.0",
  "Date": "2012-01-11",
  "Author": "Jitao David Zhang",
  "Maintainer": "Jitao David Zhang <davidvonpku@gmail.com>",
  "Description": "Import, analyze and visualize data from Roche(R)\nxCELLigence RTCA systems. The package imports real-time cell\nelectrical impedance data into R. As an alternative to\ncommercial software shipped along the system, the Bioconductor\npackage RTCA provides several unique transformation\n(normalization) strategies and various visualization tools.",
  "License": "LGPL-3",
  "LazyLoad": "yes",
  "Collate": "AllClasses.R AllGenerics.R AllMethods.R algorithms.R\nvisualization.R RTCAfunctions.R spectramaxImport.R",
  "URL": "http://code.google.com/p/xcelligence/,http://www.xcelligence.roche.com/,http://www.nextbiomotif.com/Home/scientific-programming",
  "biocViews": "ImmunoOncology, CellBasedAssays, Infrastructure,\nVisualization, TimeCourse",
  "Repository": "https://bioc-release.r-universe.dev",
  "Date/Publication": "2026-04-28 12:34:14 UTC",
  "RemoteUrl": "https://github.com/bioc/RTCA",
  "RemoteRef": "RELEASE_3_23",
  "RemoteSha": "60140414cb9e539b2d7fb8e9eade52eeef76dcd4",
  "NeedsCompilation": "no",
  "Packaged": {
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    "User": "root"
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  "MD5sum": "56a58ba9800009074a1e6ce8c099fac7",
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  "_type": "src",
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    "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n",
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    "email": "davidvonpku@gmail.com",
    "login": "accio",
    "description": "A Computational Biologist in Drug Discovery",
    "uuid": 1397024
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      "n": 2
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    "immunooncology",
    "cellbasedassays",
    "infrastructure",
    "visualization",
    "timecourse"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
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    "count": 382,
    "source": "https://www.bioconductor.org/packages/stats/bioc/RTCA"
  },
  "_mentions": 516,
  "_searchresults": 12,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/RTCA.html",
    "manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "actionTrack",
    "actionTrack<-",
    "addAction",
    "alphaNames",
    "alphaNames2Pos",
    "combineRTCA",
    "controlView",
    "derivativeTransform",
    "expID",
    "expID<-",
    "factor2numeric",
    "getAction",
    "interpolationTransform",
    "nearestTimeIndex",
    "orderAction",
    "parseRTCA",
    "plateView",
    "plot",
    "plotGridEffect",
    "ratioTransform",
    "relevels",
    "repairAlphaName",
    "reset",
    "rgrTransform",
    "rmAction",
    "rowcol2pos",
    "sliceRTCA",
    "smoothTransform",
    "spectramaxImport",
    "startTime",
    "startTime<-",
    "timeline",
    "timeline<-",
    "timepoints",
    "timepoints<-",
    "timeUnit",
    "timeUnit<-",
    "updateAction"
  ],
  "_help": [
    {
      "page": "alphaNames",
      "title": "Auxilliary functions for experiments with microtitre plates",
      "topics": [
        "alphaNames",
        "alphaNames2Pos",
        "repairAlphaName",
        "rowcol2pos"
      ]
    },
    {
      "page": "combineRTCA",
      "title": "Combine a list of RTCA objects",
      "topics": [
        "combineRTCA"
      ]
    },
    {
      "page": "controlView",
      "title": "PLOT CONTROL WELLS IN RTCA DATA",
      "topics": [
        "controlView"
      ]
    },
    {
      "page": "derivativeTransform",
      "title": "DERIVATIVE TRANSFORM OF RTCA OBJECT",
      "topics": [
        "derivativeTransform"
      ]
    },
    {
      "page": "factor2numeric",
      "title": "FACTOR UNITILITIES",
      "topics": [
        "factor2numeric",
        "relevels"
      ]
    },
    {
      "page": "interpolationTransform",
      "title": "TRANSFORM RTCA DATA WITH INTERPOLATION",
      "topics": [
        "interpolationTransform"
      ]
    },
    {
      "page": "nearestTimeIndex",
      "title": "GET INDEX FOR NEAREST TIME",
      "topics": [
        "nearestTimeIndex"
      ]
    },
    {
      "page": "parseRTCA",
      "title": "PARSE RTCA OUTPUT FILE",
      "topics": [
        "parseRTCA"
      ]
    },
    {
      "page": "plateView",
      "title": "PLATE VIEW OF RTCA DATA",
      "topics": [
        "plateView"
      ]
    },
    {
      "page": "plotGridEffect",
      "title": "PLOT GRID EFFECT OF RTCA",
      "topics": [
        "plotGridEffect"
      ]
    },
    {
      "page": "ratioTransform",
      "title": "RATIO TRANSFORMATION OF RTCA DATA",
      "topics": [
        "ratioTransform"
      ]
    },
    {
      "page": "rgrTransform",
      "title": "TRANSFORM RTCA DATA INTO RELATIVE GROWTH RATE",
      "topics": [
        "rgrTransform"
      ]
    },
    {
      "page": "RTCA-class",
      "title": "Class \"RTCA\"",
      "topics": [
        "addAction,RTCA,numeric,character-method",
        "derivativeTransform,RTCA-method",
        "expID",
        "expID,RTCA-method",
        "expID<-",
        "expID<-,RTCA-method",
        "getAction,RTCA,numeric-method",
        "interpolationTransform,RTCA-method",
        "plot,RTCA-method",
        "plotRTCA,RTCA-method",
        "ratioTransform,RTCA-method",
        "rgrTransform,RTCA-method",
        "rmAction,RTCA,numeric-method",
        "RTCA-class",
        "RTCAtimeline,RTCA-method",
        "RTCAtimeline<-,RTCA-method",
        "show,RTCA-method",
        "smoothTransform,RTCA,ANY-method",
        "smoothTransform,RTCA,missing-method",
        "time,RTCA-method",
        "timeline",
        "timeline,RTCA-method",
        "timeline<-",
        "timeline<-,RTCA-method",
        "timepoints",
        "timepoints,RTCA-method",
        "timepoints<-",
        "timepoints<-,RTCA-method",
        "updateAction,RTCA,numeric,character-method"
      ]
    },
    {
      "page": "RTCAtimeline-class",
      "title": "Class \"RTCAtimeline\"",
      "topics": [
        "actionTrack",
        "actionTrack,RTCAtimeline-method",
        "actionTrack<-",
        "actionTrack<-,RTCAtimeline,data.frame-method",
        "addAction",
        "addAction,RTCAtimeline,numeric,character-method",
        "getAction",
        "getAction,RTCAtimeline,numeric-method",
        "orderAction",
        "orderAction,RTCAtimeline-method",
        "reset",
        "reset,RTCAtimeline-method",
        "rmAction",
        "rmAction,RTCAtimeline,numeric-method",
        "RTCAtimeline-class",
        "startTime",
        "startTime,RTCAtimeline-method",
        "startTime<-",
        "startTime<-,RTCAtimeline,POSIXct-method",
        "timeUnit",
        "timeUnit,RTCAtimeline-method",
        "timeUnit<-",
        "timeUnit<-,RTCAtimeline,character-method",
        "updateAction",
        "updateAction,RTCAtimeline,numeric,character-method"
      ]
    },
    {
      "page": "sliceRTCA",
      "title": "SLICE RTCA OBJECT WITH TIME",
      "topics": [
        "sliceRTCA"
      ]
    },
    {
      "page": "smoothTransform",
      "title": "SMOOTH TRANSFORM OF RTCA OBJECT",
      "topics": [
        "smoothTransform"
      ]
    },
    {
      "page": "spectramaxImport",
      "title": "Import output files from Spectramax spectrophotometer",
      "topics": [
        "spectramaxImport"
      ]
    }
  ],
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    "Biobase",
    "BiocGenerics",
    "generics",
    "gtools",
    "RColorBrewer"
  ],
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      "source": "aboutRTCA.Rnw",
      "filename": "aboutRTCA.pdf",
      "title": "Introduction to Data Analysis of the Roche xCELLigence System with RTCA Package",
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      "created": "2013-11-01 20:10:06",
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