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  "Title": "Clinical datasets from The Cancer Genome Atlas Project",
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  "Date": "2016-04-26",
  "Author": "Marcin Kosinski <m.p.kosinski@gmail.com>",
  "Maintainer": "Marcin Kosinski <m.p.kosinski@gmail.com>",
  "Description": "Package provides clinical datasets from The Cancer Genome\nAtlas Project for all cohorts types from\nhttp://gdac.broadinstitute.org/. Clinical data format is\nexplained here\nhttps://wiki.nci.nih.gov/display/TCGA/Clinical+Data+Overview.\nData from 2015-11-01 snapshot.",
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      "filename": "downloading_clinical_datasets.html",
      "title": "Using RTCGA package to download clinical data that are included in RTCGA.clinical package",
      "author": "Marcin Kosinski",
      "engine": "knitr::rmarkdown",
      "headings": [
        "RTCGA package",
        "How to download clinical data to gain the same datasets as in RTCGA.clinical package?",
        "Available cohorts",
        "Downloading clinical files",
        "Reading downloaded clinical dataset",
        "Shortening paths and directories",
        "Removing NA files from data2 folder",
        "Paths to clinical data",
        "Reading clinical data using readTCGA",
        "Saving clinical data to RTCGA.clinical package"
      ],
      "created": "2015-09-14 14:34:39",
      "modified": "2015-12-14 19:05:51",
      "commits": 9
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}