{ "_id": "6a1e97751d7bb097a0a6d0e7", "Package": "RedisParam", "Title": "Provide a 'redis' back-end for BiocParallel", "Version": "1.14.0", "Authors@R": "c(\nperson(\n\"Martin\", \"Morgan\",\nemail = \"mtmorgan.bioc@gmail.com\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-5874-8148\")\n),\nperson(\"Jiefei\", \"Wang\", role = \"aut\"))", "Description": "This package provides a Redis-based back-end for\nBiocParallel, enabling an alternative mechanism for distributed\ncomputation. The The 'manager' distributes tasks to a 'worker'\npool through a central Redis server, rather than directly to\nworkers as with other BiocParallel implementations. This means\nthat the worker pool can change dynamically during job\nevaluation. All features of BiocParallel are supported,\nincluding reproducible random number streams, logging to the\nmanager, and alternative 'load balancing' task distributions.", "SystemRequirements": "hiredis", "License": "Artistic-2.0", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "Collate": "'Redis.R' 'RedisBackend-class.R' 'RedisParam-class.R'\n'RedisParam-accessors.R' 'RedisParam-logger.R'\n'RedisParam-methods.R' 'RedisTaskManager.R' 'zzz.R'", "biocViews": "Infrastructure", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "libhiredis-dev", "Repository": "https://bioc-release.r-universe.dev", "Date/Publication": "2026-04-28 12:58:42 UTC", "RemoteUrl": "https://github.com/bioc/RedisParam", "RemoteRef": "RELEASE_3_23", "RemoteSha": "01804a70b8603bc061bbbe5be88709d0e1638381", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-02 08:36:36 UTC", "User": "root" }, "Author": "Martin Morgan [aut, cre] (ORCID:\n),\nJiefei Wang [aut]", "Maintainer": "Martin Morgan ", "MD5sum": "6b7378cdeb68dd9c9b14d01b7abbe248", "_user": "bioc-release", "_type": "src", "_file": "RedisParam_1.14.0.tar.gz", "_fileid": "90c2168c8b4714e2bb0a4f1404a80d3e3a39cd3b6b9127dc6b29001084a78886", "_filesize": 635175, "_sha256": "90c2168c8b4714e2bb0a4f1404a80d3e3a39cd3b6b9127dc6b29001084a78886", "_created": "2026-06-02T08:36:36.000Z", "_published": "2026-06-02T08:42:29.097Z", "_jobs": [ { "job": 79031703058, "time": 148, "config": "bioc-checks", "r": "4.6.0", "check": "WARNING", "artifact": "7352919431" }, { "job": 79031703002, "time": 204, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "7352937866" }, { "job": 79031703064, "time": 160, "config": "linux-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "7352923630" }, { "job": 79031702975, "time": 106, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "7352972523" }, { "job": 79031702978, "time": 111, "config": "macos-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "7352975364" }, { "job": 79031116740, "time": 204, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7352866352" }, { "job": 79031703010, "time": 124, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7352910748" }, { "job": 79031703093, "time": 146, "config": "windows-devel", "r": "4.7.0", "check": "NOTE", "artifact": "7352918602" }, { "job": 79031703000, "time": 163, "config": "windows-oldrel", "r": "4.5.3", "check": "NOTE", "artifact": "7352924920" }, { "job": 79031703099, "time": 150, "config": "windows-release", "r": "4.6.0", "check": "NOTE", "artifact": "7352919580" } ], "_bioccheck": { "error": 0, "warning": 1, "note": 5 }, "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26808204812", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/bioc/RedisParam", "_commit": { "id": "01804a70b8603bc061bbbe5be88709d0e1638381", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n", "time": 1777381122 }, "_maintainer": { "name": "Martin Morgan", "email": "mtmorgan.bioc@gmail.com", "login": "mtmorgan", "orcid": "0000-0002-5874-8148", "description": "", "uuid": 118552 }, "_distro": "noble", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.2.0", "role": "Depends" }, { "package": "BiocParallel", "version": ">= 1.29.12", "role": "Depends" }, { "package": "methods", "role": "Imports" }, { "package": "redux", "role": "Imports" }, { "package": "withr", "role": "Imports" }, { "package": "logger", "role": "Imports" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "testthat", "role": "Suggests" }, { "package": "BiocStyle", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2025-52", "n": 2 }, { "week": "2026-18", "n": 1 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.15.0", "bioc": "3.24" }, { "branch": "release", "version": "1.14.0", "bioc": "3.23" } ], "_topics": [ "infrastructure" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 314, "source": "https://www.bioconductor.org/packages/stats/bioc/RedisParam" }, "_searchresults": 23, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/RedisParam.html", "manual.pdf" ], "_homeurl": "https://github.com/mtmorgan/redisparam", "_realowner": "bioc", "_cranurl": false, "_exports": [ "bpbackend", "bpisup", "bplog<-", "bpstart", "bpstop", "bpstopall", "bpworkers", "RedisParam", "rpalive", "rphost", "rpisworker", "rppassword", "rpport", "rpstopall", "rpworkers" ], "_help": [ { "page": "RedisParam-deprecated", "title": "Deprecated functions in the RedisParam package", "topics": [ "bpstopall" ] }, { "page": "RedisParam-class", "title": "Enable redis-based parallel evaluation in BiocParallel", "topics": [ "bpbackend,RedisParam-method", "bpisup,RedisParam-method", "bplog<-,RedisParam,logical-method", "bpstart,RedisParam-method", "bpstop,RedisParam-method", "bpworkers,RedisParam-method", "RedisParam", "rpalive", "rphost", "rpisworker", "rppassword", "rpport", "rpstopall", "rpworkers" ] } ], "_readme": "https://github.com/bioc/RedisParam/raw/RELEASE_3_23/README.md", "_rundeps": [ "BH", "BiocParallel", "codetools", "cpp11", "digest", "formatR", "futile.logger", "futile.options", "lambda.r", "logger", "R6", "redux", "snow", "storr", "withr" ], "_vignettes": [ { "source": "RedisParamDeveloperGuide.Rmd", "filename": "RedisParamDeveloperGuide.html", "title": "RedisParam for Developers", "author": "Jiefei Wang", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "General design principles", "Data structure in Redis", "Workflow", "Manager", "Submit a task to Redis", "Receive a result from Redis", "Worker", "Receive a task from Redis", "Send a result to Redis", "Session information" ], "created": "2022-06-08 17:53:35", "modified": "2022-06-08 17:53:35", "commits": 1 }, { "source": "RedisParamUserGuide.Rmd", "filename": "RedisParamUserGuide.html", "title": "Using RedisParam", "author": "Martin Morgan", "engine": "knitr::rmarkdown", "headings": [ "Getting started", "Use", "Manager and workers from a single R session", "Independently-managed workers", "Session info" ], "created": "2022-06-08 17:53:35", "modified": "2022-06-08 17:53:35", "commits": 1 } ], "_score": 4.838849090737256, "_indexed": false, "_nocasepkg": "redisparam", "_universes": [ "bioc-release" ], "_indexurl": "https://bioc.r-universe.dev/RedisParam", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.14.0", "date": "2026-06-02T08:40:00.000Z", "distro": "noble", "commit": "01804a70b8603bc061bbbe5be88709d0e1638381", "fileid": "167b10ed9c3780474369fb9b5e29be1221d460a1e22094eb730f9a1b5b27e8da", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26808204812" }, { "r": "4.6.0", "os": "linux", "version": "1.14.0", "date": "2026-06-02T08:39:18.000Z", "distro": "noble", "commit": "01804a70b8603bc061bbbe5be88709d0e1638381", "fileid": "b84151e2038df9b77b9c34ddcda2c8d78c7a36a55ba1361d52a5926c6aa1b222", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26808204812" }, { "r": "4.5.3", "os": "mac", "version": "1.14.0", "date": "2026-06-02T08:41:48.000Z", "commit": "01804a70b8603bc061bbbe5be88709d0e1638381", "fileid": "9e023c4801ba89037ba2ef7dd4525eb82c4013f28af849ed9e53d37f4725c877", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26808204812" }, { "r": "4.6.0", "os": "mac", "version": "1.14.0", "date": "2026-06-02T08:41:51.000Z", "commit": "01804a70b8603bc061bbbe5be88709d0e1638381", "fileid": "c436a7777b4aa7d68ba5520bde098872b00be60f18839fe827fd939c7ce94643", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26808204812" }, { "r": "4.6.0", "os": "wasm", "version": "1.14.0", "date": "2026-06-02T08:38:59.000Z", "commit": "01804a70b8603bc061bbbe5be88709d0e1638381", "fileid": "4366f7e389706f7bab5d78bccb6293d52509dbfa56ce562f87255d2609e9bdf3", "status": "success", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26808204812" }, { "r": "4.7.0", "os": "win", "version": "1.14.0", "date": "2026-06-02T08:38:05.000Z", "commit": "01804a70b8603bc061bbbe5be88709d0e1638381", "fileid": "1e5b7ccec8d8a8b1c48fe3f27f5a84d4658bc2a30db75a6ba1b461f483642e2d", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26808204812" }, { "r": "4.5.3", "os": "win", "version": "1.14.0", "date": "2026-06-02T08:38:20.000Z", "commit": "01804a70b8603bc061bbbe5be88709d0e1638381", "fileid": "e808d59f09a35ab195b525190dbf90e26aa63155bcbee6fefe37c08723fb4981", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26808204812" }, { "r": "4.6.0", "os": "win", "version": "1.14.0", "date": "2026-06-02T08:38:05.000Z", "commit": "01804a70b8603bc061bbbe5be88709d0e1638381", "fileid": "e39cda1bf8240d0017cce6b68a99ecb3369d282720b5c8ae8142879839781de7", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26808204812" } ] }