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Transductomics is a DNA sequencing-based\nmethod for the detection and characterization of transduction\nevents in pure cultures and complex communities. Transductomics\nrelies on mapping sequencing reads from a viral-like particle\n(VLP)-fraction of a sample to contigs assembled from the\nmetagenome (whole-community) of the same sample. Reads from\nbacterial DNA carried by VLPs will map back to the bacterial\ncontigs of origin creating read coverage patterns indicative of\nongoing transduction.", "License": "GPL-2", "Encoding": "UTF-8", "LazyData": "false", "biocViews": "Coverage, Metagenomics, PatternLogic, Classification,\nSequencing", "RoxygenNote": "7.3.3", "URL": "https://github.com/jlmaier12/TrIdent,\nhttps://jlmaier12.github.io/TrIdent/", "BugReports": "https://github.com/jlmaier12/TrIdent/issues", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "Config/pak/sysreqs": "cmake make libicu-dev", "Repository": "Bioconductor 3.23", "Date/Publication": "2026-04-28 13:04:09 UTC", "RemoteUrl": "https://github.com/bioc/TrIdent", "RemoteRef": "RELEASE_3_23", "RemoteSha": "57933f33587a2284aff832fd5145b8bbd2ce27de", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-11 08:11:10 UTC", "User": "root" }, "Author": "Jessie Maier [aut, cre] (ORCID:\n),\nJorden Rabasco [aut, ctb] (ORCID:\n),\nCraig Gin [aut] 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