{
  "_id": "6aaa47a3ea78b3e62eaca2e5",
  "Package": "agilp",
  "Type": "Package",
  "Title": "Agilent expression array processing package",
  "Version": "3.44.0",
  "Date": "2012-06-10",
  "Author": "Benny Chain <b.chain@ucl.ac.uk>",
  "Maintainer": "Benny Chain <b.chain@ucl.ac.uk>",
  "Description": "More about what it does (maybe more than one line)",
  "License": "GPL-3",
  "Packaged": {
    "Date": "2026-09-16 07:03:58 UTC",
    "User": "root"
  },
  "Repository": "Bioconductor 3.23",
  "Date/Publication": "2026-04-28 12:36:56 UTC",
  "RemoteUrl": "https://github.com/bioc/agilp",
  "RemoteRef": "RELEASE_3_23",
  "RemoteSha": "3c7a6927c35bdd58b805784a5860cec99da06011",
  "NeedsCompilation": "no",
  "_user": "bioc-release",
  "_type": "src",
  "_file": "agilp_3.44.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/c574de311cb487f7822992cd78b6a6a1fa2d27348aeeaee34faa0d43fb58062c",
  "_filesize": 479566,
  "_sha256": "c574de311cb487f7822992cd78b6a6a1fa2d27348aeeaee34faa0d43fb58062c",
  "_expires": "2026-12-25T07:39:12.000Z",
  "_created": "2026-09-16T07:03:58.000Z",
  "_published": "2026-09-16T07:39:14.898Z",
  "_bioccheck": {
    "error": 2,
    "warning": 3,
    "note": 15
  },
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35066443432",
  "_status": "success",
  "_upstream": "https://github.com/bioc/agilp",
  "_commit": {
    "id": "3c7a6927c35bdd58b805784a5860cec99da06011",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n",
    "time": 1777379816
  },
  "_maintainer": {
    "name": "Benny Chain",
    "email": "b.chain@ucl.ac.uk",
    "login": "bchain",
    "description": "",
    "uuid": 5867751
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 104698450020,
      "time": 141,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "10434457681"
    },
    {
      "job": 104698449653,
      "time": 127,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "10434487521"
    },
    {
      "job": 104698449591,
      "time": 196,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "10434099949"
    },
    {
      "job": 104698449604,
      "time": 66,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "10435746558"
    },
    {
      "job": 104698449573,
      "time": 87,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "10435921043"
    },
    {
      "job": 104697771002,
      "time": 155,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10434526978"
    },
    {
      "job": 104698449619,
      "time": 90,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "10434616175"
    },
    {
      "job": 104698449621,
      "time": 60,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "10434851247"
    },
    {
      "job": 104698449658,
      "time": 64,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "10434512136"
    },
    {
      "job": 104698449649,
      "time": 66,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "10434377740"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.14.0",
      "role": "Depends"
    }
  ],
  "_owner": "bioc",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 1
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "3.45.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "3.44.0",
      "bioc": "3.23"
    }
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 467,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 552,
    "source": "https://www.bioconductor.org/packages/stats/bioc/agilp"
  },
  "_mentions": 3,
  "_searchresults": 6,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/agilp.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0",
      "date": "2010-03-15"
    }
  ],
  "_exports": [
    "AALoess",
    "AAProcess",
    "Baseline",
    "Equaliser",
    "filenamex",
    "IDswop",
    "Loader"
  ],
  "_help": [
    {
      "page": "AALoess",
      "title": "Normalises a set of gene expression data files using LOESS",
      "topics": [
        "AALoess"
      ]
    },
    {
      "page": "AAProcess",
      "title": "Extracts raw expression data from Agilent expression array scanner files.",
      "topics": [
        "AAProcess"
      ]
    },
    {
      "page": "Baseline",
      "title": "Constructs a file with the mean of each probe from a set of raw expression array data files",
      "topics": [
        "Baseline"
      ]
    },
    {
      "page": "Equaliser",
      "title": "Trims a set of gene expression data files to include only the set of identifiers common to all files",
      "topics": [
        "Equaliser"
      ]
    },
    {
      "page": "filenamex",
      "title": "A file name listing utility",
      "topics": [
        "filenamex"
      ]
    },
    {
      "page": "IDswop",
      "title": "Mapping expression data across bioinformatic identifiers",
      "topics": [
        "IDswop"
      ]
    },
    {
      "page": "Loader",
      "title": "A file choser utility file.",
      "topics": [
        "Loader"
      ]
    }
  ],
  "_rundeps": [],
  "_vignettes": [
    {
      "source": "agilp_manual.Rnw",
      "filename": "agilp_manual.pdf",
      "title": "An R Package for processing expression microarray data",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2013-11-01 20:27:10",
      "modified": "2015-01-06 15:07:05",
      "commits": 3
    }
  ],
  "_score": 3.778151250383644,
  "_indexed": false,
  "_nocasepkg": "agilp",
  "_universes": [
    "bioc-release"
  ],
  "_indexurl": "https://bioc.r-universe.dev/agilp",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "3.44.0",
      "date": "2026-09-16T07:06:15.000Z",
      "distro": "resolute",
      "commit": "3c7a6927c35bdd58b805784a5860cec99da06011",
      "fileid": "https://r2.ropensci.org/5d7948203c59d4befe342845688bb44b32ab819847e739435a871bda66a825c4",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35066443432"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "3.44.0",
      "date": "2026-09-16T07:07:24.000Z",
      "distro": "resolute",
      "commit": "3c7a6927c35bdd58b805784a5860cec99da06011",
      "fileid": "https://r2.ropensci.org/ab3d09e37c8d9947d0579b3868b152c4246bf452095f19976de663afe682da6a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35066443432"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "3.44.0",
      "date": "2026-09-16T07:38:45.000Z",
      "commit": "3c7a6927c35bdd58b805784a5860cec99da06011",
      "fileid": "https://r2.ropensci.org/6a21b8f48dec74e12fb2c01ff457e726baa6b34e4cb5599d4c881efe08b409b7",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35066443432"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "3.44.0",
      "date": "2026-09-16T07:37:59.000Z",
      "commit": "3c7a6927c35bdd58b805784a5860cec99da06011",
      "fileid": "https://r2.ropensci.org/72e78430fc6d82246ff4a0ad505aa4dd1e8c479142c76720007e035872f99122",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35066443432"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "3.44.0",
      "date": "2026-09-16T07:05:48.000Z",
      "commit": "3c7a6927c35bdd58b805784a5860cec99da06011",
      "fileid": "https://r2.ropensci.org/cc4063c808bbbf082d8091dc4e411f56b2b83cd14157e34fbfacdb581a79fc90",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35066443432"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "3.44.0",
      "date": "2026-09-16T07:05:04.000Z",
      "commit": "3c7a6927c35bdd58b805784a5860cec99da06011",
      "fileid": "https://r2.ropensci.org/947e1b866bf29fe3380e345f4862fb85e3e69ca405a61e51e812b952920addc9",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35066443432"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "3.44.0",
      "date": "2026-09-16T07:05:06.000Z",
      "commit": "3c7a6927c35bdd58b805784a5860cec99da06011",
      "fileid": "https://r2.ropensci.org/0efed486cbdd20a5257a7f5bf82fb744160f9e11ff2e5f89215d69feb527c93b",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35066443432"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "3.44.0",
      "date": "2026-09-16T07:05:07.000Z",
      "commit": "3c7a6927c35bdd58b805784a5860cec99da06011",
      "fileid": "https://r2.ropensci.org/39c2e7a926eef05103a94916345378c3bec51efac191785285b2fa37c618e872",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/35066443432"
    }
  ]
}