{ "_id": "6a1ad5ff1d7bb097a09e5796", "Package": "clustComp", "Version": "1.40.0", "Date": "2017-07-16", "Title": "Clustering Comparison Package", "Author": "Aurora Torrente and Alvis Brazma.", "Maintainer": "Aurora Torrente ", "biocViews": "GeneExpression, Clustering, Visualization", "Description": "clustComp is a package that implements several techniques\nfor the comparison and visualisation of relationships between\ndifferent clustering results, either flat versus flat or\nhierarchical versus flat. These relationships among clusters\nare displayed using a weighted bi-graph, in which the nodes\nrepresent the clusters and the edges connect pairs of nodes\nwith non-empty intersection; the weight of each edge is the\nnumber of elements in that intersection and is displayed\nthrough the edge thickness. The best layout of the bi-graph is\nprovided by the barycentre algorithm, which minimises the\nweighted number of crossings. In the case of comparing a\nhierarchical and a non-hierarchical clustering, the dendrogram\nis pruned at different heights, selected by exploring the tree\nby depth-first search, starting at the root. Branches are\ndecided to be split according to the value of a scoring\nfunction, that can be based either on the aesthetics of the\nbi-graph or on the mutual information between the hierarchical\nand the flat clusterings. A mapping between groups of clusters\nfrom each side is constructed with a greedy algorithm, and can\nbe additionally visualised.", "License": "GPL (>= 2)", "NeedsCompilation": "no", "Repository": "https://bioc-release.r-universe.dev", "Date/Publication": "2026-04-28 12:42:39 UTC", "RemoteUrl": "https://github.com/bioc/clustComp", "RemoteRef": "RELEASE_3_23", "RemoteSha": "9a636edf57026f8e631dc6a760a84a8ec5ecd5a8", "Packaged": { "Date": "2026-05-30 09:00:01 UTC", "User": "root" }, "MD5sum": "aa76d2f2ceaab00c2bae7c4fe2a663a1", "_user": "bioc-release", "_type": "src", "_file": "clustComp_1.40.0.tar.gz", "_fileid": "a37c8930aca2f3919c5d341d5509f03f69c98a3f97c0c7a5b8b4e513bc96c005", "_filesize": 171150, "_sha256": "a37c8930aca2f3919c5d341d5509f03f69c98a3f97c0c7a5b8b4e513bc96c005", "_created": "2026-05-30T09:00:01.000Z", "_published": "2026-05-30T12:20:15.177Z", "_jobs": [ { "job": 78638232311, "time": 150, "config": "bioc-checks", "r": "4.6.0", "check": "ERROR", "artifact": "7307030946" }, 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{ "package": "colonCA", "role": "Suggests" }, { "package": "RUnit", "role": "Suggests" }, { "package": "BiocGenerics", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 1 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.41.0", "bioc": "3.24" }, { "branch": "release", "version": "1.40.0", "bioc": "3.23" } ], "_topics": [ "geneexpression", "clustering", "visualization" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 376, "source": "https://www.bioconductor.org/packages/stats/bioc/clustComp" }, "_mentions": 2, "_searchresults": 3, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/clustComp.html", "extra/contents.json", "extra/NEWS.html", 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