{
  "_id": "6aca1db6fe5cc25786e84d5f",
  "Package": "etec16s",
  "Maintainer": "Joseph N. Paulson <jpaulson@jimmy.harvard.edu>",
  "Author": "Joseph N. Paulson",
  "Version": "1.40.0",
  "License": "Artistic-2.0",
  "Title": "Individual-specific changes in the human gut microbiota after\nchallenge with enterotoxigenic Escherichia coli and subsequent\nciprofloxacin treatment",
  "Description": "16S rRNA gene sequencing data to study changes in the\nfaecal microbiota of 12 volunteers during a human challenge\nstudy with ETEC (H10407) and subsequent treatment with\nciprofloxacin.",
  "LazyData": "yes",
  "biocViews": "ExperimentData, SequencingData, MicrobiomeData",
  "NeedsCompilation": "no",
  "Repository": "Bioconductor 3.23",
  "Date/Publication": "2026-04-28 12:29:43 UTC",
  "RemoteUrl": "https://github.com/bioc/etec16s",
  "RemoteRef": "RELEASE_3_23",
  "RemoteSha": "f495decdc3ea1b606c94a3385b72fe533c1b586d",
  "Packaged": {
    "Date": "2026-10-10 11:08:40 UTC",
    "User": "root"
  },
  "_user": "bioc-release",
  "_type": "src",
  "_file": "etec16s_1.40.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/15df4069708051b93b1876fe1dda33f2d2c4c321d4fc5d0066b4f94ead435a8d",
  "_filesize": 329897,
  "_sha256": "15df4069708051b93b1876fe1dda33f2d2c4c321d4fc5d0066b4f94ead435a8d",
  "_expires": "2027-01-18T11:12:51.000Z",
  "_created": "2026-10-10T11:08:40.000Z",
  "_published": "2026-10-10T11:12:54.550Z",
  "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38047219990",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_bioccheck": {
    "error": 1,
    "warning": 2,
    "note": 9
  },
  "_upstream": "https://github.com/bioc/etec16s",
  "_commit": {
    "id": "f495decdc3ea1b606c94a3385b72fe533c1b586d",
    "author": "lshep <lori.shepherd@roswellpark.org>",
    "committer": "lshep <lori.shepherd@roswellpark.org>",
    "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n",
    "time": 1777379383
  },
  "_maintainer": {
    "name": "Joseph N. Paulson",
    "email": "jpaulson@jimmy.harvard.edu",
    "login": "jnpaulson",
    "description": "",
    "uuid": 3039619
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 114199537343,
      "time": 122,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "11668311650"
    },
    {
      "job": 114199537410,
      "time": 210,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "11668760440"
    },
    {
      "job": 114199537417,
      "time": 213,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "11667782552"
    },
    {
      "job": 114199112698,
      "time": 152,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11668351272"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.3",
      "role": "Depends"
    },
    {
      "package": "Biobase",
      "role": "Depends"
    },
    {
      "package": "metagenomeSeq",
      "version": ">= 1.12.0",
      "role": "Depends"
    }
  ],
  "_owner": "bioc",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 1
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.41.0",
      "bioc": "3.24",
      "repository": "data/experiment"
    },
    {
      "branch": "release",
      "version": "1.40.0",
      "bioc": "3.23",
      "repository": "data/experiment"
    }
  ],
  "_topics": [
    "experimentdata",
    "sequencingdata",
    "microbiomedata",
    "datapkg"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 476,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_searchresults": 10,
  "_datapkg": true,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/etec16s.html",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt"
  ],
  "_cranurl": false,
  "_exports": [],
  "_datasets": [
    {
      "name": "etec16s",
      "title": "Curated dataset of many healthy and moderate-to-severe diarretic gut 16s samples on the 454 FLEX platform.",
      "object": "etec16s",
      "class": [
        "MRexperiment"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "etec16s-package",
      "title": "Dataset of 16S samples from 12 subjects challenged with enterotoxigenic Escherichia coli.",
      "topics": [
        "etec16s-package"
      ]
    },
    {
      "page": "etec16s",
      "title": "Curated dataset of many healthy and moderate-to-severe diarretic gut 16s samples on the 454 FLEX platform.",
      "topics": [
        "etec16s"
      ]
    }
  ],
  "_rundeps": [
    "Biobase",
    "BiocGenerics",
    "bitops",
    "caTools",
    "codetools",
    "foreach",
    "generics",
    "glmnet",
    "gplots",
    "gtools",
    "iterators",
    "KernSmooth",
    "lattice",
    "limma",
    "locfit",
    "Matrix",
    "matrixStats",
    "metagenomeSeq",
    "RColorBrewer",
    "Rcpp",
    "RcppEigen",
    "shape",
    "statmod",
    "survival",
    "Wrench"
  ],
  "_vignettes": [
    {
      "source": "etec16s.Rnw",
      "filename": "etec16s.pdf",
      "title": "etec16s",
      "engine": "utils::Sweave",
      "headings": [
        "The Data"
      ],
      "created": "2016-04-06 16:08:02",
      "modified": "2016-04-06 16:08:02",
      "commits": 1
    }
  ],
  "_score": 3.3010299956639813,
  "_indexed": false,
  "_nocasepkg": "etec16s",
  "_universes": [
    "bioc-release"
  ],
  "_indexurl": "https://bioc.r-universe.dev/etec16s",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.40.0",
      "date": "2026-10-10T11:12:08.000Z",
      "distro": "resolute",
      "commit": "f495decdc3ea1b606c94a3385b72fe533c1b586d",
      "fileid": "https://r2.ropensci.org/a3fe8b0afd420318612a85df74c643703fd12c41faee88ebfc8cb0a102fe2fa3",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38047219990"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.40.0",
      "date": "2026-10-10T11:12:07.000Z",
      "distro": "resolute",
      "commit": "f495decdc3ea1b606c94a3385b72fe533c1b586d",
      "fileid": "https://r2.ropensci.org/6af9b976dd5043f840d5a8d930652d2543de0012f4e7ba7cdda34c011cb63e08",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38047219990"
    }
  ]
}