{ "_id": "6aca1faafe5cc25786e84f25", "Package": "gDRtestData", "Title": "gDRtestData - R data package with testing dose response data", "Version": "1.10.0", "Date": "2026-04-13", "Description": "R package with internal dose-response test data. Package\nprovides functions to generate input testing data that can be\nused as the input for gDR pipeline. It also contains qs2 files\nwith MAE data processed by gDR.", "Authors@R": "c(person(\"Aleksander\", \"Chlebowski\", role=c(\"aut\")),\nperson(\"Bartosz\", \"Czech\", role=c(\"aut\"),\ncomment = c(ORCID = \"0000-0002-9908-3007\")),\nperson(\"Arkadiusz\", \"Gladki\", role=c(\"cre\", \"aut\"), email=\"gladki.arkadiusz@gmail.com\",\ncomment = c(ORCID = \"0000-0002-7059-6378\")),\nperson(\"Marc\", \"Hafner\", role=c(\"aut\"),\ncomment = c(ORCID = \"0000-0003-1337-7598\")),\nperson(\"Marcin\", \"Kamianowski\", role=c(\"aut\")),\nperson(\"Sergiu\", \"Mocanu\", role=c(\"aut\")),\nperson(\"Natalia\", \"Potocka\", role=c(\"aut\")),\nperson(\"Dariusz\", \"Scigocki\", role=c(\"aut\")),\nperson(\"Janina\", \"Smola\", role=c(\"aut\")),\nperson(\"Allison\", \"Voung\", role=c(\"aut\")))", "Enhanced": "", "URL": "https://github.com/gdrplatform/gDRtestData,\nhttps://gdrplatform.github.io/gDRtestData/", "BugReports": "https://github.com/gdrplatform/gDRtestData/issues", "biocViews": "ExperimentData, TechnologyData", "VignetteBuilder": "knitr", "License": "Artistic-2.0", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.1", "Config/testthat/edition": "3", "Repository": "Bioconductor 3.23", "Date/Publication": "2026-04-28 12:36:47 UTC", "RemoteUrl": "https://github.com/bioc/gDRtestData", "RemoteRef": "RELEASE_3_23", "RemoteSha": "f203a3f975759e24cfc641bda9df015d4aede3cb", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-10 11:16:53 UTC", "User": "root" }, "Author": "Aleksander Chlebowski [aut],\nBartosz Czech [aut] (ORCID: ),\nArkadiusz Gladki [cre, aut] (ORCID:\n),\nMarc Hafner [aut] (ORCID: ),\nMarcin Kamianowski [aut],\nSergiu Mocanu [aut],\nNatalia Potocka [aut],\nDariusz Scigocki [aut],\nJanina Smola [aut],\nAllison Voung [aut]", "Maintainer": "Arkadiusz Gladki ", "_user": "bioc-release", "_type": "src", "_file": "gDRtestData_1.10.0.tar.gz", "_fileid": "https://r2.ropensci.org/8f2f7e6b9006ae2f23901a7fbc3453dec5875cf398d5a17b8801ce20dce25267", "_filesize": 16516948, "_sha256": "8f2f7e6b9006ae2f23901a7fbc3453dec5875cf398d5a17b8801ce20dce25267", "_expires": "2027-01-18T11:21:12.000Z", "_created": "2026-10-10T11:16:53.000Z", "_published": "2026-10-10T11:21:14.742Z", "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38047624661", "_status": "success", "_host": "GitHub-Actions", "_bioccheck": { "error": 0, "warning": 1, "note": 4 }, "_upstream": "https://github.com/bioc/gDRtestData", "_commit": { "id": "f203a3f975759e24cfc641bda9df015d4aede3cb", "author": "lshep ", "committer": "lshep ", "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n", "time": 1777379807 }, "_maintainer": { "name": "Arkadiusz Gladki", "email": "gladki.arkadiusz@gmail.com", "login": "gladkia", "linkedin": "in/arkadiusz-gladki-55b94735", "orcid": "0000-0002-7059-6378", "twitter": "@biosmooth", "description": "", "uuid": 41166437 }, "_distro": "resolute", "_jobs": [ { "job": 114200964824, "time": 133, "config": "bioc-checks", "r": "4.6.1", "check": "WARNING", "artifact": "11667832870" }, { "job": 114200964820, "time": 199, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11668726159" }, { "job": 114200964799, "time": 214, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11668367477" }, { "job": 114200306847, "time": 231, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11668730854" } ], "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.2", "role": "Depends" }, { "package": "checkmate", "role": "Imports" }, { "package": "data.table", "role": "Imports" }, { "package": "BiocStyle", "role": "Suggests" }, { "package": "gDRstyle", "version": ">= 1.7.1", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "qs2", "role": "Suggests" }, { "package": "reshape2", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "SummarizedExperiment", "role": "Suggests" }, { "package": "testthat", "role": "Suggests" }, { "package": "yaml", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2025-44", "n": 1 }, { "week": "2026-16", "n": 1 }, { "week": "2026-18", "n": 1 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.11.9", "bioc": "3.24", "repository": "data/experiment" }, { "branch": "release", "version": "1.10.0", "bioc": "3.23", "repository": "data/experiment" } ], "_topics": [ "experimentdata", "technologydata", "datapkg" ], "_stars": 2, "_contributors": [ { "user": "bczech", "count": 191, "uuid": 32614650 }, { "user": "gladkia", "count": 101, "uuid": 41166437 }, { "user": "j-smola", "count": 78, "uuid": 31825957 }, { "user": "gdr-tech", "count": 22, "uuid": 253898595 }, { "user": "marcin-kam", "count": 17, "uuid": 20190698 }, { "user": "darsoo", "count": 16, "uuid": 28986516 }, { "user": "tazovsky", "count": 13, "uuid": 29068994 }, { "user": "lshep", "count": 8, "uuid": 18724380 }, { "user": "hpages", "count": 4, "uuid": 8810451 }, { "user": "marchafner", "count": 2, "uuid": 6557213 }, { "user": "sergiumocanu", "count": 2, "uuid": 15331281 }, { "user": "allisonvuong", "count": 2, "uuid": 47435771 }, { "user": "dominikzabinski", "count": 1, "uuid": 22429831 } ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 476, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_devurl": "https://github.com/gdrplatform/gdrtestdata", "_pkgdown": "https://gdrplatform.github.io/gDRtestData/", "_searchresults": 6, "_datapkg": true, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/gDRtestData.html", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md" ], "_cranurl": false, "_exports": [ "add_concentration", "add_data_replicates", "add_day0_data", "create_synthetic_cell_lines", "create_synthetic_drugs", "generate_e_inf", "generate_ec50", "generate_hill_coef", "generate_response_data", "get_test_dataset_paths", "prepareCodilutionData", "prepareComboMergedData", "prepareData", "prepareMergedData" ], "_help": [ { "page": "add_concentration", "title": "Add concentrations", "topics": [ "add_concentration" ] }, { "page": "add_data_replicates", "title": "Add data replicates", "topics": [ "add_data_replicates" ] }, { "page": "add_day0_data", "title": "Add data with day 0", "topics": [ "add_day0_data" ] }, { "page": "create_synthetic_cell_lines", "title": "Create data.table with synthetic cell lines", "topics": [ "create_synthetic_cell_lines" ] }, { "page": "create_synthetic_drugs", "title": "Create data.table with synthetic drugs", "topics": [ "create_synthetic_drugs" ] }, { "page": "generate_e_inf", "title": "Calculate E inf metric", "topics": [ "generate_e_inf" ] }, { "page": "generate_ec50", "title": "Calculate EC50 metric", "topics": [ "generate_ec50" ] }, { "page": "generate_hill_coef", "title": "Generate hill coefficient", "topics": [ "generate_hill_coef" ] }, { "page": "generate_response_data", "title": "Generate response data", "topics": [ "generate_response_data" ] }, { "page": "get_test_dataset_paths", "title": "get_test_dataset_paths", "topics": [ "get_test_dataset_paths" ] }, { "page": "prepareCodilutionData", "title": "prepareCodilutionData", "topics": [ "prepareCodilutionData" ] }, { "page": "prepareComboMergedData", "title": "prepareComboMergedData", "topics": [ "prepareComboMergedData" ] }, { "page": "prepareData", "title": "prepareData", "topics": [ "prepareData" ] }, { "page": "prepareMergedData", "title": "prepareMergedData", "topics": [ "prepareMergedData" ] } ], "_readme": "https://github.com/bioc/gDRtestData/raw/RELEASE_3_23/README.md", "_rundeps": [ "backports", "checkmate", "data.table" ], "_vignettes": [ { "source": "gDRtestData.Rmd", "filename": "gDRtestData.html", "title": "gDRtestData", "author": "gDR team", "engine": "knitr::rmarkdown", "headings": [ "Overview", "Use Cases", "Synthetic data generation", "Synthetic object of gDR data model", "Annotation data", "Other", "SessionInfo" ], "created": "2023-03-28 13:36:52", "modified": "2026-04-19 06:11:32", "commits": 5 } ], "_score": 5.556302500767288, "_indexed": false, "_nocasepkg": "gdrtestdata", "_universes": [ "bioc-release" ], "_indexurl": "https://bioc.r-universe.dev/gDRtestData", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.10.0", "date": "2026-10-10T11:20:14.000Z", "distro": "resolute", "commit": "f203a3f975759e24cfc641bda9df015d4aede3cb", "fileid": "https://r2.ropensci.org/3406094e4822b52298e1a9d98921d95ad38d6effa8f684ee5250318894e6a472", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38047624661" }, { "r": "4.6.1", "os": "linux", "version": "1.10.0", "date": "2026-10-10T11:20:28.000Z", "distro": "resolute", "commit": "f203a3f975759e24cfc641bda9df015d4aede3cb", "fileid": "https://r2.ropensci.org/167d0e66c3e202d26e9051559fe62b65f0aa79c6222180873929e78522ca209f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38047624661" } ] }