{ "_id": "6a194844acfb0bcc41ddad67", "Package": "genomes", "Type": "Package", "Title": "Genome sequencing project metadata", "Version": "3.42.0", "Date": "2015-12-21", "Author": "Chris Stubben", "Maintainer": "Chris Stubben ", "License": "GPL-3", "biocViews": "Annotation, Genetics", "Description": "Download genome and assembly reports from NCBI", "Packaged": { "Date": "2026-05-29 07:01:16 UTC", "User": "root" }, "Config/pak/sysreqs": "libssl-dev libx11-dev", "Repository": "https://bioc-release.r-universe.dev", "Date/Publication": "2026-04-28 12:34:40 UTC", "RemoteUrl": "https://github.com/bioc/genomes", "RemoteRef": "RELEASE_3_23", "RemoteSha": "a918f3565010212be1c9f1f1775cc08256fa0448", "NeedsCompilation": "no", "MD5sum": "26c5db0e52f98f25cfad1370c8a6a521", "_user": "bioc-release", "_type": "src", "_file": "genomes_3.42.0.tar.gz", "_fileid": "824ed10755cbb6ffdadb16e4bbfe5684fb49a229e95e54233242fdc343f3001a", "_filesize": 120702, "_sha256": "824ed10755cbb6ffdadb16e4bbfe5684fb49a229e95e54233242fdc343f3001a", "_created": "2026-05-29T07:01:16.000Z", "_published": "2026-05-29T08:03:16.199Z", "_jobs": [ { "job": 78453678684, "time": 137, "config": "bioc-checks", "r": "4.6.0", "check": "ERROR", "artifact": "7284995938" }, { "job": 78453678727, "time": 131, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "7284994633" }, { "job": 78453678681, "time": 160, "config": "linux-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "7285001501" }, { "job": 78453678691, "time": 120, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "7285985852" }, { "job": 78453678694, "time": 108, "config": "macos-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "7285983477" }, { "job": 78453362009, "time": 148, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7284961808" }, { "job": 78453678709, "time": 107, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7284988657" }, { "job": 78453678743, "time": 78, "config": "windows-devel", "r": "4.7.0", "check": "NOTE", "artifact": "7284981320" }, { "job": 78453678759, "time": 85, "config": "windows-oldrel", "r": "4.5.3", "check": "NOTE", "artifact": "7284983086" }, { "job": 78453678768, "time": 68, "config": "windows-release", "r": "4.6.0", "check": "NOTE", "artifact": "7284979029" } ], "_bioccheck": { "error": 1, "warning": 3, "note": 11 }, "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623094564", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/bioc/genomes", "_commit": { "id": "a918f3565010212be1c9f1f1775cc08256fa0448", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n", "time": 1777379680 }, "_maintainer": { "name": "Chris Stubben", "email": "stubben@lanl.gov" }, "_distro": "noble", "_registered": true, "_dependencies": [ { "package": "readr", "role": "Depends" }, { "package": "curl", "role": "Depends" } ], "_owner": "bioc", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 1 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "3.43.0", "bioc": "3.24" }, { "branch": "release", "version": "3.42.0", "bioc": "3.23" } ], "_topics": [ "annotation", "genetics" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 384, "source": "https://www.bioconductor.org/packages/stats/bioc/genomes" }, "_searchresults": 17, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/genomes.html", "manual.pdf" ], "_realowner": "bioc", "_cranurl": false, "_exports": [ "genus", "reports", "species" ], "_help": [ { "page": "genus", "title": "Extract the genus name", "topics": [ "genus" ] }, { "page": "reports", "title": "Genome and assembly reports", "topics": [ "reports" ] }, { "page": "species", "title": "Extract the species name", "topics": [ "species" ] } ], "_rundeps": [ "bit", "bit64", "cli", "clipr", "cpp11", "crayon", "curl", "glue", "hms", "lifecycle", "magrittr", "pillar", "pkgconfig", "prettyunits", "progress", "R6", "readr", "rlang", "tibble", "tidyselect", "tzdb", "utf8", "vctrs", "vroom", "withr" ], "_vignettes": [ { "source": "genomes.Rnw", "filename": "genomes.pdf", "title": "Genome metadata", "engine": "utils::Sweave", "headings": [], "created": "2015-12-21 22:36:46", "modified": "2015-12-21 22:41:50", "commits": 2 } ], "_score": 3.5314789170422554, "_indexed": false, "_nocasepkg": "genomes", "_universes": [ "bioc-release" ], "_indexurl": "https://bioc.r-universe.dev/genomes", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "3.42.0", "date": "2026-05-29T07:03:27.000Z", "distro": "noble", "commit": "a918f3565010212be1c9f1f1775cc08256fa0448", "fileid": "bce834246c75581be9edf3f19dd72a98bdd14f7bb841fe9744895e3d44336ab7", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623094564" }, { "r": "4.6.0", "os": "linux", "version": "3.42.0", "date": "2026-05-29T07:03:56.000Z", "distro": "noble", "commit": "a918f3565010212be1c9f1f1775cc08256fa0448", "fileid": "efb01e19044fede438a1aacf8c6f2ea493850a518e0be50e8c09b8d334b375a5", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623094564" }, { "r": "4.5.3", "os": "mac", "version": "3.42.0", "date": "2026-05-29T08:02:43.000Z", "commit": "a918f3565010212be1c9f1f1775cc08256fa0448", "fileid": "9f901878e76981ee48a473e5afc2588eda1b7e8a528164ecdeb779595152bd9a", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623094564" }, { "r": "4.6.0", "os": "mac", "version": "3.42.0", "date": "2026-05-29T08:02:40.000Z", "commit": "a918f3565010212be1c9f1f1775cc08256fa0448", "fileid": "5912ee5a705ea9a818484ae43cf5eeba99f4a2a80b38e62724f2cf113fb3ed43", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623094564" }, { "r": "4.6.0", "os": "wasm", "version": "3.42.0", "date": "2026-05-29T07:03:17.000Z", "commit": "a918f3565010212be1c9f1f1775cc08256fa0448", "fileid": "1d5047c2e461106db8fd7f4f2083aadabe8c15d8fd46d945cb9c3d32713147f7", "status": "success", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623094564" }, { "r": "4.7.0", "os": "win", "version": "3.42.0", "date": "2026-05-29T07:02:27.000Z", "commit": "a918f3565010212be1c9f1f1775cc08256fa0448", "fileid": "5dd1192fe0bba3eece86ecbb612cf8b20e34d4da73b6d78e076a6a1be0ccf3c6", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623094564" }, { "r": "4.5.3", "os": "win", "version": "3.42.0", "date": "2026-05-29T07:02:32.000Z", "commit": "a918f3565010212be1c9f1f1775cc08256fa0448", "fileid": "ac2d968bdeffe7d6d31666a198a4f637962fcab2bbc8dbd1b81806980e427a73", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623094564" }, { "r": "4.6.0", "os": "win", "version": "3.42.0", "date": "2026-05-29T07:02:20.000Z", "commit": "a918f3565010212be1c9f1f1775cc08256fa0448", "fileid": "54145ef095d9f66b2fb88f4ee5c4f1cd0edf8c385d72ee667f5ae2c3be97463c", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623094564" } ] }