{ "_id": "6a1956edacfb0bcc41de23c9", "Package": "glycoTraitR", "Type": "Package", "Title": "Compute and analyze the glycan structrual traits from GPSM data", "Version": "1.0.0", "Authors@R": "c(person(\"Bingyuan\", \"Zhang\",\nemail = \"zhang.bingyuan.w8@f.mail.nagoya-u.ac.jp\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-4892-323X\")),\nperson(\"Koichi\", \"Himori\",\nemail = \"himori.koichi.b5@f.mail.nagoya-u.ac.jp\",\nrole = c(\"aut\")),\nperson(\"Yusuke\", \"Matsui\",\nemail = \"matsui.yusuke.d4@f.mail.nagoya-u.ac.jp\",\nrole = c(\"aut\", \"fnd\")))", "Description": "GlycoTraitR is an R package for analyzing glycoproteomics\ndata, particularly glycopeptide-spectrum matches (GPSMs). It\nsupports results generated by the pGlyco3 and Glyco-Decipher\nsearch engines. The package parses glycan structures, computes\nmonosaccharide compositions and structural traits, and performs\ndifferential analysis of glycan heterogeneity. It constructs\ntrait-by-PSM matrices stored in a SummarizedExperiment object,\nsupports user-defined structural motifs, and provides\nvisualization utilities for interpreting glycan trait changes.", "URL": "https://github.com/matsui-lab/glycoTraitR", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "biocViews": "Proteomics, MassSpectrometry, Visualization, Software", "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr", "BugReports": "https://github.com/matsui-lab/glycoTraitR/issues", "Config/testthat/edition": "3", "Config/pak/sysreqs": "cmake libglpk-dev make libicu-dev libxml2-dev\nzlib1g-dev", "Repository": "https://bioc-release.r-universe.dev", "Date/Publication": "2026-04-28 13:06:19 UTC", "RemoteUrl": "https://github.com/bioc/glycoTraitR", "RemoteRef": "RELEASE_3_23", "RemoteSha": "3c457d70e9095f8c254665dcd1f4ca53e5788d0c", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-29 07:49:24 UTC", "User": "root" }, "Author": "Bingyuan Zhang [aut, cre] (ORCID:\n),\nKoichi 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