{
  "_id": "6a1fdf4bb401979e73438f4e",
  "Package": "massiR",
  "Type": "Package",
  "Title": "massiR: MicroArray Sample Sex Identifier",
  "Version": "1.48.0",
  "Date": "2014-09-15",
  "Author": "Sam Buckberry",
  "Maintainer": "Sam Buckberry <sam.buckberry@adelaide.edu.au>",
  "Description": "Predicts the sex of samples in gene expression microarray\ndatasets",
  "License": "GPL-3",
  "Collate": "'massi_y.R' 'massi_y_plot.R' 'massi_select.R'\n'massi_cluster.R' 'massi_cluster_plot.R' 'massi_dip.R'",
  "LazyData": "true",
  "biocViews": "Software, Microarray, GeneExpression, Clustering,\nClassification, QualityControl",
  "Repository": "https://bioc-release.r-universe.dev",
  "Date/Publication": "2026-04-28 12:38:46 UTC",
  "RemoteUrl": "https://github.com/bioc/massiR",
  "RemoteRef": "RELEASE_3_23",
  "RemoteSha": "3ab8a0527c5b7b5c6753cc8011a635fea64619d5",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-03 07:56:53 UTC",
    "User": "root"
  },
  "MD5sum": "f959515f74dbbbf6dc5e53b585044f91",
  "_user": "bioc-release",
  "_type": "src",
  "_file": "massiR_1.48.0.tar.gz",
  "_fileid": "3114df5d3a4da330e2e6b8cf6ee07d2756eb708e4d9e597a85b8174579bd7bdf",
  "_filesize": 1189249,
  "_sha256": "3114df5d3a4da330e2e6b8cf6ee07d2756eb708e4d9e597a85b8174579bd7bdf",
  "_created": "2026-06-03T07:56:53.000Z",
  "_published": "2026-06-03T08:01:15.033Z",
  "_jobs": [
    {
      "job": 79247860822,
      "time": 132,
      "config": "bioc-checks",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7378865126"
    },
    {
      "job": 79247860813,
      "time": 171,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7378878564"
    },
    {
      "job": 79247860862,
      "time": 209,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7378890696"
    },
    {
      "job": 79247860833,
      "time": 99,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7378853806"
    },
    {
      "job": 79247860853,
      "time": 107,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7378856738"
    },
    {
      "job": 79247421945,
      "time": 163,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7378818410"
    },
    {
      "job": 79247860837,
      "time": 107,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7378856469"
    },
    {
      "job": 79247860852,
      "time": 98,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7378860160"
    },
    {
      "job": 79247860842,
      "time": 97,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7378852947"
    },
    {
      "job": 79247860855,
      "time": 75,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7378845228"
    }
  ],
  "_bioccheck": {
    "error": 2,
    "warning": 4,
    "note": 13
  },
  "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26871394660",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/bioc/massiR",
  "_commit": {
    "id": "3ab8a0527c5b7b5c6753cc8011a635fea64619d5",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n",
    "time": 1777379926
  },
  "_maintainer": {
    "name": "Sam Buckberry",
    "email": "sam.buckberry@adelaide.edu.au"
  },
  "_distro": "noble",
  "_registered": true,
  "_dependencies": [
    {
      "package": "cluster",
      "role": "Depends"
    },
    {
      "package": "gplots",
      "role": "Depends"
    },
    {
      "package": "diptest",
      "role": "Depends"
    },
    {
      "package": "Biobase",
      "role": "Depends"
    },
    {
      "package": "R",
      "version": ">= 3.0.2",
      "role": "Depends"
    },
    {
      "package": "biomaRt",
      "role": "Suggests"
    },
    {
      "package": "RUnit",
      "role": "Suggests"
    },
    {
      "package": "BiocGenerics",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 1
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.49.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.48.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "software",
    "microarray",
    "geneexpression",
    "clustering",
    "classification",
    "qualitycontrol"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 418,
    "source": "https://www.bioconductor.org/packages/stats/bioc/massiR"
  },
  "_mentions": 3,
  "_searchresults": 14,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/massiR.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "massi_cluster",
    "massi_cluster_plot",
    "massi_dip",
    "massi_select",
    "massi_y",
    "massi_y_plot"
  ],
  "_datasets": [
    {
      "name": "massi.eset",
      "title": "massi.eset",
      "object": "massi.eset",
      "class": [
        "ExpressionSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "massi.test.dataset",
      "title": "The massi test dataset",
      "object": "massi.test.dataset",
      "class": [
        "data.frame"
      ],
      "fields": [
        "S1",
        "S2",
        "S3",
        "S4",
        "S5",
        "S6",
        "S7",
        "S8",
        "S9",
        "S10",
        "S11",
        "S12",
        "S13",
        "S14",
        "S15",
        "S16",
        "S17",
        "S18",
        "S19",
        "S20",
        "S21",
        "S22",
        "S23",
        "S24",
        "S25",
        "S26",
        "S27",
        "S28",
        "S29",
        "S30",
        "S31",
        "S32",
        "S33",
        "S34",
        "S35",
        "S36",
        "S37",
        "S38",
        "S39",
        "S40",
        "S41",
        "S42",
        "S43",
        "S44",
        "S45",
        "S46",
        "S47",
        "S48",
        "S49",
        "S50",
        "S51",
        "S52",
        "S53",
        "S54",
        "S55",
        "S56",
        "S57",
        "S58",
        "S59",
        "S60"
      ],
      "rows": 1026,
      "table": true,
      "tojson": true
    },
    {
      "name": "massi.test.probes",
      "title": "The massi test probes",
      "object": "massi.test.probes",
      "class": [
        "data.frame"
      ],
      "fields": [],
      "rows": 74,
      "table": true,
      "tojson": true
    },
    {
      "name": "y.probes",
      "title": "Y chromosome probe list",
      "object": "y.probes",
      "class": [
        "list"
      ],
      "fields": [],
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "massiR-package",
      "title": "massiR: a microarry Gene Expression Sample Sex Identifier",
      "topics": [
        "massi-package",
        "massi"
      ]
    },
    {
      "page": "massi_cluster",
      "title": "massi_cluster",
      "topics": [
        "massi_cluster"
      ]
    },
    {
      "page": "massi_cluster_plot",
      "title": "massi_cluster_plot",
      "topics": [
        "massi_cluster_plot"
      ]
    },
    {
      "page": "massi_dip",
      "title": "massi_dip",
      "topics": [
        "massi_dip"
      ]
    },
    {
      "page": "massi_select",
      "title": "massi_select",
      "topics": [
        "massi_select"
      ]
    },
    {
      "page": "massi_y",
      "title": "massi_y",
      "topics": [
        "massi_y"
      ]
    },
    {
      "page": "massi_y_plot",
      "title": "massi_y_plot",
      "topics": [
        "massi_y_plot"
      ]
    },
    {
      "page": "massi_eset",
      "title": "massi.eset",
      "topics": [
        "massi.eset"
      ]
    },
    {
      "page": "massi.test.dataset",
      "title": "The massi test dataset",
      "topics": [
        "massi.test.dataset"
      ]
    },
    {
      "page": "massi.test.probes",
      "title": "The massi test probes",
      "topics": [
        "massi.test.probes"
      ]
    },
    {
      "page": "y_probes",
      "title": "Y chromosome probe list",
      "topics": [
        "y.probes"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/massiR/raw/RELEASE_3_23/README.md",
  "_rundeps": [
    "Biobase",
    "BiocGenerics",
    "bitops",
    "caTools",
    "cluster",
    "diptest",
    "generics",
    "gplots",
    "gtools",
    "KernSmooth"
  ],
  "_vignettes": [
    {
      "source": "massiR_Vignette.Rnw",
      "filename": "massiR_Vignette.pdf",
      "title": "massiR_Example",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2014-03-20 23:55:49",
      "modified": "2014-09-15 00:45:20",
      "commits": 2
    }
  ],
  "_score": 4.623249290397901,
  "_indexed": false,
  "_nocasepkg": "massir",
  "_universes": [
    "bioc-release"
  ],
  "_indexurl": "https://bioc.r-universe.dev/massiR",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.48.0",
      "date": "2026-06-03T07:59:42.000Z",
      "distro": "noble",
      "commit": "3ab8a0527c5b7b5c6753cc8011a635fea64619d5",
      "fileid": "4f67cbc9e1c0a1c1f6742df8a622ba3e0e4f0e6ae9c714e6bee78d6862c0a2c3",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26871394660"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.48.0",
      "date": "2026-06-03T08:00:19.000Z",
      "distro": "noble",
      "commit": "3ab8a0527c5b7b5c6753cc8011a635fea64619d5",
      "fileid": "e2ccce893f26f0d89c8d4f02bc6a9551c22d8d71f746c227f815219d83cdec7e",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26871394660"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.48.0",
      "date": "2026-06-03T07:58:36.000Z",
      "commit": "3ab8a0527c5b7b5c6753cc8011a635fea64619d5",
      "fileid": "c808351fe24a585f4ac41f96a5939ad5e880b837b0a15eac00e614a26bbff64a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26871394660"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.48.0",
      "date": "2026-06-03T07:58:43.000Z",
      "commit": "3ab8a0527c5b7b5c6753cc8011a635fea64619d5",
      "fileid": "d48d56d38899b1e985e3c29b07be9ce8c05d95e80b39193a22d2afaf74306168",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26871394660"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.48.0",
      "date": "2026-06-03T07:58:57.000Z",
      "commit": "3ab8a0527c5b7b5c6753cc8011a635fea64619d5",
      "fileid": "48fb91bef58f75096194defa5b7b2d657b76caed13ada34f48e761d9f3078c9f",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26871394660"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.48.0",
      "date": "2026-06-03T07:58:44.000Z",
      "commit": "3ab8a0527c5b7b5c6753cc8011a635fea64619d5",
      "fileid": "56e723d1a9ca4f227951b22646685450549a78aa9bac881358946dd634f7d525",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26871394660"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.48.0",
      "date": "2026-06-03T07:58:19.000Z",
      "commit": "3ab8a0527c5b7b5c6753cc8011a635fea64619d5",
      "fileid": "6cd36ff38022291dcf09649df6836f92bf9b6d880eb47cfc74fc93cc670fd94f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26871394660"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.48.0",
      "date": "2026-06-03T07:58:03.000Z",
      "commit": "3ab8a0527c5b7b5c6753cc8011a635fea64619d5",
      "fileid": "c15544111a33855d179f76af8b7e0b5fa67a7a99ba0386b12bd7db9e7e327a39",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26871394660"
    }
  ]
}