{
  "_id": "6a2270b2cd65a98ecbd48a29",
  "Package": "miRNAmeConverter",
  "Type": "Package",
  "Title": "Convert miRNA Names to Different miRBase Versions",
  "Version": "1.40.0",
  "Authors@R": "person(\"Stefan\", \"Haunsberger\", \"J.\", email =\n\"stefan.haunsberger@gmail.com\", role = c(\"aut\", \"cre\"))",
  "Description": "Translating mature miRNA names to different miRBase\nversions, sequence retrieval, checking names for validity and\ndetecting miRBase version of a given set of names (data from\nhttp://www.mirbase.org/).",
  "License": "Artistic-2.0",
  "biocViews": "Preprocessing, miRNA",
  "LazyData": "TRUE",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "6.0.1",
  "NeedsCompilation": "no",
  "Author": "Stefan Haunsberger [aut, cre]",
  "Maintainer": "Stefan J. Haunsberger <stefan.haunsberger@gmail.com>",
  "Config/pak/sysreqs": "libicu-dev libpng-dev libssl-dev zlib1g-dev",
  "Repository": "https://bioc-release.r-universe.dev",
  "Date/Publication": "2026-04-28 12:42:54 UTC",
  "RemoteUrl": "https://github.com/bioc/miRNAmeConverter",
  "RemoteRef": "RELEASE_3_23",
  "RemoteSha": "d695617ce282b2a8f0f8c49ce71698b2c9dd4f6d",
  "Packaged": {
    "Date": "2026-06-05 06:41:10 UTC",
    "User": "root"
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  "MD5sum": "06ec49a920e50651125ebf3c3a31693c",
  "_user": "bioc-release",
  "_type": "src",
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  "_created": "2026-06-05T06:41:10.000Z",
  "_published": "2026-06-05T06:46:10.504Z",
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  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/bioc/miRNAmeConverter",
  "_commit": {
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    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n",
    "time": 1777380174
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  "_maintainer": {
    "name": "Stefan J. Haunsberger",
    "email": "stefan.haunsberger@gmail.com",
    "login": "stefanhaunsberger",
    "description": "It's a meee",
    "uuid": 5872625
  },
  "_distro": "noble",
  "_registered": true,
  "_dependencies": [
    {
      "package": "miRBaseVersions.db",
      "role": "Depends"
    },
    {
      "package": "DBI",
      "role": "Imports"
    },
    {
      "package": "AnnotationDbi",
      "role": "Imports"
    },
    {
      "package": "reshape2",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Suggests"
    },
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  "_owner": "bioc",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 1
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  ],
  "_tags": [],
  "_bioc": [
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      "version": "1.41.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.40.0",
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    }
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  "_topics": [
    "preprocessing",
    "mirna"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 326,
    "source": "https://www.bioconductor.org/packages/stats/bioc/miRNAmeConverter"
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  "_mentions": 6,
  "_searchresults": 7,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/miRNAmeConverter.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "assessVersion",
    "checkMiRNAName",
    "currentVersion",
    "getMirnasForMirbaseVersion",
    "MiRNANameConverter",
    "nOrganisms",
    "nTotalEntries",
    "saveResults",
    "show",
    "translateMiRNAName",
    "validOrganisms",
    "validVersions"
  ],
  "_datasets": [
    {
      "name": "example.miRNAs",
      "title": "miRNA names.",
      "object": "example-miRNAs",
      "class": [
        "character"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "assessMiRNASwappingMIMAT",
      "title": "Check if given miRNA names can be assigned to unique MIMAT accessions among all versions",
      "topics": [
        "assessMiRNASwappingMIMAT"
      ]
    },
    {
      "page": "assessVersion",
      "title": "Assess miRBase version",
      "topics": [
        "assessVersion",
        "assessVersion,MiRNANameConverter-method"
      ]
    },
    {
      "page": "checkMiRNAName",
      "title": "Check miRNA names for validity",
      "topics": [
        "checkMiRNAName",
        "checkMiRNAName,MiRNANameConverter-method"
      ]
    },
    {
      "page": "currentVersion",
      "title": "Get current version",
      "topics": [
        "currentVersion",
        "currentVersion,MiRNANameConverter-method"
      ]
    },
    {
      "page": "currentVersion-set",
      "title": "Set current version",
      "topics": [
        "currentVersion<-"
      ]
    },
    {
      "page": "example.miRNAs",
      "title": "miRNA names.",
      "topics": [
        "example.miRNAs"
      ]
    },
    {
      "page": "miRNAmeConverter",
      "title": "MiRNANameConverter constructor",
      "topics": [
        "miRNAmeConverter-package",
        "miRNAmeConverter"
      ]
    },
    {
      "page": "MiRNANameConverter",
      "title": "Instantiate from MiRNANameConverter class",
      "topics": [
        "MiRNANameConverter"
      ]
    },
    {
      "page": "MiRNANameConverter-ANY-method",
      "title": "MiRNANameConverter constructor",
      "topics": [
        "MiRNANameConverter,ANY-method"
      ]
    },
    {
      "page": "nOrganisms",
      "title": "Get number of organisms",
      "topics": [
        "nOrganisms",
        "nOrganisms,MiRNANameConverter-method"
      ]
    },
    {
      "page": "nOrganisms-set",
      "title": "Set number of organisms",
      "topics": [
        "nOrganisms<-"
      ]
    },
    {
      "page": "nTotalEntries",
      "title": "Get total number database entries",
      "topics": [
        "nTotalEntries",
        "nTotalEntries,MiRNANameConverter-method"
      ]
    },
    {
      "page": "nTotalEntries-set",
      "title": "Set total number database entries",
      "topics": [
        "nTotalEntries<-"
      ]
    },
    {
      "page": "saveResults",
      "title": "Save miRNA translation results",
      "topics": [
        "saveResults",
        "saveResults,MiRNANameConverter,data.frame-method"
      ]
    },
    {
      "page": "show-MiRNANameConverter-method",
      "title": "Show-method",
      "topics": [
        "show,MiRNANameConverter-method"
      ]
    },
    {
      "page": "translateMiRNAName",
      "title": "Translate miRNA name",
      "topics": [
        "translateMiRNAName",
        "translateMiRNAName,MiRNANameConverter,character-method"
      ]
    },
    {
      "page": "validOrganisms",
      "title": "Get valid organisms",
      "topics": [
        "validOrganisms",
        "validOrganisms,MiRNANameConverter-method"
      ]
    },
    {
      "page": "validOrganisms-set",
      "title": "Set valid organisms",
      "topics": [
        "validOrganisms<-"
      ]
    },
    {
      "page": "validVersions",
      "title": "Get valid versions",
      "topics": [
        "validVersions",
        "validVersions,MiRNANameConverter-method"
      ]
    },
    {
      "page": "validVersions-set",
      "title": "Set valid versions",
      "topics": [
        "validVersions<-"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/miRNAmeConverter/raw/RELEASE_3_23/README.md",
  "_rundeps": [
    "AnnotationDbi",
    "askpass",
    "Biobase",
    "BiocGenerics",
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    "XVector"
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  "_score": 3.778151250383644,
  "_indexed": false,
  "_nocasepkg": "mirnameconverter",
  "_universes": [
    "bioc-release"
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  "_indexurl": "https://bioc.r-universe.dev/miRNAmeConverter",
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