{ "_id": "6a194bbdacfb0bcc41ddce41", "Package": "microRNA", "Version": "1.70.0", "Author": "R. Gentleman, S. Falcon", "Title": "Data and functions for dealing with microRNAs", "Description": "Different data resources for microRNAs and some functions\nfor manipulating them.", "License": "Artistic-2.0", "Maintainer": "\"Michael Lawrence\" ", "biocViews": "Infrastructure, GenomeAnnotation, SequenceMatching", "Config/pak/sysreqs": "zlib1g-dev", "Repository": "https://bioc-release.r-universe.dev", "Date/Publication": "2026-04-28 12:33:13 UTC", "RemoteUrl": "https://github.com/bioc/microRNA", "RemoteRef": "RELEASE_3_23", "RemoteSha": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-05-29 07:12:44 UTC", "User": "root" }, "MD5sum": "d99007b46f893bf9ad5d49a4833d65e7", "_user": "bioc-release", "_type": "src", "_file": "microRNA_1.70.0.tar.gz", "_fileid": "9eacd0abe2432e964fe73b43cf69bd56207d9aecd385c1b14c645658fadafbc7", "_filesize": 6133654, "_sha256": "9eacd0abe2432e964fe73b43cf69bd56207d9aecd385c1b14c645658fadafbc7", "_created": "2026-05-29T07:12:44.000Z", "_published": "2026-05-29T08:18:05.813Z", "_jobs": [ { "job": 78455177627, "time": 152, "config": "bioc-checks", "r": "4.6.0", "check": "ERROR", "artifact": "7285179273" }, { "job": 78455177713, "time": 160, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "7285181692" }, { "job": 78455177731, "time": 199, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7285192485" }, { "job": 78455177709, "time": 156, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7285180496" }, { "job": 78455177664, "time": 315, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7285223455" }, { "job": 78455177740, "time": 128, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7286220764" }, { "job": 78455177719, "time": 351, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "7286231252" }, { "job": 78455177732, "time": 127, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7286220325" }, { "job": 78455177660, "time": 210, "config": "macos-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7286185944" }, { "job": 78454828100, "time": 165, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7285138736" }, { "job": 78455177580, "time": 109, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7285167907" }, { "job": 78455177690, "time": 118, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7285170200" }, { "job": 78455177638, "time": 128, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7285173982" }, { "job": 78455177736, "time": 86, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7285161854" } ], "_bioccheck": { "error": 2, "warning": 0, "note": 8 }, "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/bioc/microRNA", "_commit": { "id": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n", "time": 1777379593 }, "_maintainer": { "name": "\"Michael Lawrence\"", "email": "lawremi@gmail.com", "login": "lawremi", "linkedin": "in/michael-lawrence-74a9b482", "description": "Member of R core, contributor to @Bioconductor.", "uuid": 158190 }, "_distro": "noble", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.10", "role": "Depends" }, { "package": "Biostrings", "version": ">= 2.11.32", "role": "Imports" } ], "_owner": "bioc", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2025-29", "n": 1 }, { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 1 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.71.0", "bioc": "3.24" }, { "branch": "release", "version": "1.70.0", "bioc": "3.23" } ], "_topics": [ "infrastructure", "genomeannotation", "sequencematching", "cpp" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 682, "source": "https://www.bioconductor.org/packages/stats/bioc/microRNA" }, "_mentions": 63, "_searchresults": 6, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/microRNA.html", "manual.pdf" ], "_realowner": "bioc", "_cranurl": false, "_exports": [ "get_selfhyb_subseq", "matchSeeds", "RNA2DNA", "seedRegions", "show_selfhyb_counts", "show_selfhyb_lengths" ], "_datasets": [ { "name": "hsSeqs", "title": "Human Mature microRNA Sequences", "object": "hsSeqs", "file": "hsSeqs.rda", "class": [ "character" ], "fields": [], "table": false, "tojson": true }, { "name": "hsTargets", "title": "Human microRNAs and their target IDs", "object": "hsTargets", "file": "hsTargets.rda", "class": [ "data.frame" ], "fields": [ "name", "target", "chrom", "start", "end", "strand" ], "rows": 709015, "table": true, "tojson": true }, { "name": "mmSeqs", "title": "Mouse Mature microRNA Sequences", "object": "mmSeqs", "file": "mmSeqs.rda", "class": [ "character" ], "fields": [], "table": false, "tojson": true }, { "name": "mmTargets", "title": "Mouse microRNAs and their target IDs", "object": "mmTargets", "file": "mmTargets.rda", "class": [ "data.frame" ], "fields": [ "name", "target", "chrom", "start", "end", "strand" ], "rows": 519254, "table": true, "tojson": true }, { "name": "s3utr", "title": "Test sequence data", "object": "s3utr", "file": "s3utr.rda", "class": [ "character" ], "fields": [], "table": false, "tojson": true } ], "_help": [ { "page": "get_selfhyb_subseq", "title": "Get Self-Hybridizing Subsequences", "topics": [ "get_selfhyb_subseq", "show_selfhyb_counts", "show_selfhyb_lengths" ] }, { "page": "hsSeqs", "title": "Human Mature microRNA Sequences", "topics": [ "hsSeqs" ] }, { "page": "hsTargets", "title": "Human microRNAs and their target IDs", "topics": [ "hsTargets" ] }, { "page": "matchSeeds", "title": "A function to match seed regions to sequences.", "topics": [ "matchSeeds" ] }, { "page": "mmSeqs", "title": "Mouse Mature microRNA Sequences", "topics": [ "mmSeqs" ] }, { "page": "mmTargets", "title": "Mouse microRNAs and their target IDs", "topics": [ "mmTargets" ] }, { "page": "RNA2DNA", "title": "A Function to translate RNA sequences into DNA sequences.", "topics": [ "RNA2DNA" ] }, { "page": "s3utr", "title": "Test sequence data", "topics": [ "s3utr" ] }, { "page": "seedRegions", "title": "A function to retrieve the seed regions from microRNA sequences", "topics": [ "seedRegions" ] } ], "_rundeps": [ "BiocGenerics", "Biostrings", "crayon", "generics", "IRanges", "S4Vectors", "Seqinfo", "XVector" ], "_sysdeps": [ { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_score": 3.4771212547196626, "_indexed": false, "_nocasepkg": "microrna", "_universes": [ "bioc-release" ], "_indexurl": "https://bioc.r-universe.dev/microRNA", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.70.0", "date": "2026-05-29T07:15:19.000Z", "distro": "noble", "arch": "aarch64", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "2abb0a58a9126664a43aee168b04bd2f67cd150fc0bec6771f720dba2eedfaf6", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" }, { "r": "4.7.0", "os": "linux", "version": "1.70.0", "date": "2026-05-29T07:15:51.000Z", "distro": "noble", "arch": "x86_64", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "2bf79a603b57758c9154767f8560dbf2011438e4a5fc7a2241b93425d975e749", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" }, { "r": "4.6.0", "os": "linux", "version": "1.70.0", "date": "2026-05-29T07:15:18.000Z", "distro": "noble", "arch": "aarch64", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "79fbc0fb67667fdf4ee398b4443ed31b23e74fd78c6eb29eae7124544b801c96", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" }, { "r": "4.6.0", "os": "linux", "version": "1.70.0", "date": "2026-05-29T07:17:51.000Z", "distro": "noble", "arch": "x86_64", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "80e5a99563a451bd11e94d8cddf12a68393a03f803c651d929a1b5e36b28d34f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" }, { "r": "4.5.3", "os": "mac", "version": "1.70.0", "date": "2026-05-29T08:16:23.000Z", "arch": "aarch64", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "db230ad1cba89b2ccf5f07dda1915654d1840913eaeb47ecbf60e00edb37c4f3", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" }, { "r": "4.5.3", "os": "mac", "version": "1.70.0", "date": "2026-05-29T08:15:43.000Z", "arch": "x86_64", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "bfbca62ba8f3bec451321937c5db37f843876a293966b8a17b62d2a81851a88f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" }, { "r": "4.6.0", "os": "mac", "version": "1.70.0", "date": "2026-05-29T08:16:24.000Z", "arch": "aarch64", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "1a7b49f12a33de9a6b050bf94a2306fdf164afc7dba6ac2ca3154a50f4f65b24", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" }, { "r": "4.6.0", "os": "mac", "version": "1.70.0", "date": "2026-05-29T08:13:55.000Z", "arch": "x86_64", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "121dd44ac41a608c9f189f4efbe17cf80735fa3ca3b4541148f14b25cb915273", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" }, { "r": "4.6.0", "os": "wasm", "version": "1.70.0", "date": "2026-05-29T07:15:07.000Z", "arch": "emscripten", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "86b95a2c9e551895c9051956a721f9c92ed952d62bd5ac8c5f1288d69ae3495d", "status": "success", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" }, { "r": "4.7.0", "os": "win", "version": "1.70.0", "date": "2026-05-29T07:14:14.000Z", "arch": "x86_64", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "c1624b9594f10ff9f5fa57088c4277da463131eb8c650f68abd8a5776845a176", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" }, { "r": "4.5.3", "os": "win", "version": "1.70.0", "date": "2026-05-29T07:14:26.000Z", "arch": "x86_64", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "a525ce84e8e7761261e5bee91f60a206a2ebe613b8424357620f2c7b14645de9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" }, { "r": "4.6.0", "os": "win", "version": "1.70.0", "date": "2026-05-29T07:14:06.000Z", "arch": "x86_64", "commit": "e201e6ce6b60ec2ad4426793705492be0e36c36d", "fileid": "a4c6cc92f3ebd0056a04767b89c645589035e6ee4461ac9681ca9639f4827529", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/26623540579" } ] }