{
  "_id": "6ace3855a14063b82c3b17d2",
  "Package": "pRolocdata",
  "Type": "Package",
  "Title": "Data accompanying the pRoloc package",
  "Version": "1.50.0",
  "Authors@R": "c(person(given = \"Laurent\", family = \"Gatto\",\nemail = \"laurent.gatto@uclouvain.be\",\ncomment = c(ORCID = \"0000-0002-1520-2268\"),\nrole = \"aut\"),\nperson(given = \"Oliver\", family =\"Crook\",\nemail = \"oliver.crook@stats.ox.ac.uk\",\ncomment = c(ORCID = \"0000-0001-5669-8506\"),\nrole = \"aut\"),\nperson(given = \"Lisa\", family =\"Breckels\",\nemail = \"lms79@cam.ac.uk\",\ncomment = c(ORCID = \"0000-0001-8918-7171\"),\nrole = c(\"cre\", \"aut\")))",
  "Description": "Mass-spectrometry based spatial proteomics data sets and\nprotein complex separation data. Also contains the time course\nexpression experiment from Mulvey et al. 2015.",
  "License": "GPL-2",
  "BugReports": "https://github.com/lgatto/pRolocdata/issues",
  "URL": "https://github.com/lgatto/pRolocdata",
  "biocViews": "ExperimentData, Homo_sapiens_Data, MassSpectrometryData,\nArabidopsis_thaliana_Data, Drosophila_melanogaster_Data,\nMus_musculus_Data, StemCell, Proteome",
  "RoxygenNote": "6.1.1",
  "Encoding": "UTF-8",
  "Config/pak/sysreqs": "cmake libglpk-dev make libicu-dev libuv1-dev\nlibxml2-dev libnetcdf-dev libssl-dev zlib1g-dev",
  "Repository": "Bioconductor 3.23",
  "Date/Publication": "2026-04-28 12:25:10 UTC",
  "RemoteUrl": "https://github.com/bioc/pRolocdata",
  "RemoteRef": "RELEASE_3_23",
  "RemoteSha": "2ae05319215a5f54b29cf5ae0ddf4ba4f0635c9d",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-13 13:35:38 UTC",
    "User": "root"
  },
  "Author": "Laurent Gatto [aut] (ORCID: <https://orcid.org/0000-0002-1520-2268>),\nOliver Crook [aut] (ORCID: <https://orcid.org/0000-0001-5669-8506>),\nLisa Breckels [cre, aut] (ORCID:\n<https://orcid.org/0000-0001-8918-7171>)",
  "Maintainer": "Lisa Breckels <lms79@cam.ac.uk>",
  "_user": "bioc-release",
  "_type": "src",
  "_file": "pRolocdata_1.50.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/35f7bed24629c3c43e3afb2ef601afd12affb6d473e2a7c2ba5c46462d1996b8",
  "_filesize": 200082182,
  "_sha256": "35f7bed24629c3c43e3afb2ef601afd12affb6d473e2a7c2ba5c46462d1996b8",
  "_expires": "2027-01-21T13:55:23.000Z",
  "_created": "2026-10-13T13:35:38.000Z",
  "_published": "2026-10-13T13:55:33.605Z",
  "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38405584665",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_bioccheck": {
    "error": 1,
    "warning": 2,
    "note": 4
  },
  "_upstream": "https://github.com/bioc/pRolocdata",
  "_commit": {
    "id": "2ae05319215a5f54b29cf5ae0ddf4ba4f0635c9d",
    "author": "lshep <lori.shepherd@roswellpark.org>",
    "committer": "lshep <lori.shepherd@roswellpark.org>",
    "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n",
    "time": 1777379110
  },
  "_maintainer": {
    "name": "Lisa Breckels",
    "email": "lms79@cam.ac.uk",
    "login": "lmsimp",
    "description": "R, shiny, proteomics, Bioconductor, data science, visualisation",
    "uuid": 1698853,
    "orcid": "0000-0001-8918-7171"
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 115329964036,
      "time": 236,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "11818744999"
    },
    {
      "job": 115329964080,
      "time": 666,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "11820925542"
    },
    {
      "job": 115329964073,
      "time": 602,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "11819822070"
    },
    {
      "job": 115324383192,
      "time": 704,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11818609242"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.6.3",
      "role": "Depends"
    },
    {
      "package": "MSnbase",
      "role": "Depends"
    },
    {
      "package": "Biobase",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "pRoloc",
      "version": ">= 1.13.8",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "SummarizedExperiment",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": false,
  "_usedby": 1,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2025-45",
      "n": 1
    },
    {
      "week": "2026-17",
      "n": 1
    },
    {
      "week": "2026-18",
      "n": 1
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.51.0",
      "bioc": "3.24",
      "repository": "data/experiment"
    },
    {
      "branch": "release",
      "version": "1.50.0",
      "bioc": "3.23",
      "repository": "data/experiment"
    }
  ],
  "_topics": [
    "experimentdata",
    "homo_sapiens_data",
    "massspectrometrydata",
    "arabidopsis_thaliana_data",
    "drosophila_melanogaster_data",
    "mus_musculus_data",
    "stemcell",
    "proteome",
    "datapkg"
  ],
  "_stars": 6,
  "_contributors": [
    {
      "user": "laurentgatto",
      "count": 191,
      "uuid": 32748897
    },
    {
      "user": "lgatto",
      "count": 103,
      "uuid": 384198
    },
    {
      "user": "lmsimp",
      "count": 63,
      "uuid": 1698853
    },
    {
      "user": "ococrook",
      "count": 59,
      "uuid": 23522532
    },
    {
      "user": "hpages",
      "count": 18,
      "uuid": 8810451
    },
    {
      "user": "dtenenba",
      "count": 13,
      "uuid": 2286826
    },
    {
      "user": "lshep",
      "count": 6,
      "uuid": 18724380
    },
    {
      "user": "nturaga",
      "count": 5,
      "uuid": 2746443
    },
    {
      "user": "jwokaty",
      "count": 4,
      "uuid": 1744257
    },
    {
      "user": "sonali-bioc",
      "count": 1,
      "uuid": 6373953
    }
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 476,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_devurl": "https://github.com/lgatto/prolocdata",
  "_searchresults": 255,
  "_datapkg": true,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/pRolocdata.html",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_cranurl": false,
  "_exports": [
    "pRolocdata",
    "pRolocmetadata"
  ],
  "_datasets": [
    {
      "name": "andreyev2010",
      "title": "Six sub-cellular fraction data from mouse macrophage-like RAW264.7 cells from Andreyev et al. (2009)",
      "object": "andreyev2010",
      "file": "andreyev2010.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "andreyev2010activ",
      "title": "Six sub-cellular fraction data from mouse macrophage-like RAW264.7 cells from Andreyev et al. (2009)",
      "object": "andreyev2010activ",
      "file": "andreyev2010activ.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "andreyev2010rest",
      "title": "Six sub-cellular fraction data from mouse macrophage-like RAW264.7 cells from Andreyev et al. (2009)",
      "object": "andreyev2010rest",
      "file": "andreyev2010rest.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "andy2011",
      "title": "LOPIT experiment on Human Embryonic Kidney fibroblast HEK293T cells from Breckels et al. (2013)",
      "object": "andy2011",
      "file": "andy2011.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "andy2011goCC",
      "title": "LOPIT experiment on Human Embryonic Kidney fibroblast HEK293T cells from Breckels et al. (2013)",
      "object": "andy2011goCC",
      "file": "andy2011goCC.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "andy2011hpa",
      "title": "LOPIT experiment on Human Embryonic Kidney fibroblast HEK293T cells from Breckels et al. (2013)",
      "object": "andy2011hpa",
      "file": "andy2011hpa.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "at_chloro",
      "title": "The AT_CHLORO data base",
      "object": "at_chloro",
      "file": "at_chloro.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "baers2018",
      "title": "Synechocystis spatial proteomics",
      "object": "baers2018",
      "file": "baers2018.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Barylyuk2020ToxoLopit",
      "title": "Whole-cell spatial proteome of Toxoplasma: molecular anatomy of an apicomplexan cell",
      "object": "Barylyuk2020ToxoLopit",
      "file": "Barylyuk2020ToxoLopit.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "beltran2016HCMV120",
      "title": "Data from Beltran et al. 2016",
      "object": "beltran2016HCMV120",
      "file": "beltran2016HCMV120.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "beltran2016HCMV24",
      "title": "Data from Beltran et al. 2016",
      "object": "beltran2016HCMV24",
      "file": "beltran2016HCMV24.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "beltran2016HCMV48",
      "title": "Data from Beltran et al. 2016",
      "object": "beltran2016HCMV48",
      "file": "beltran2016HCMV48.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "beltran2016HCMV72",
      "title": "Data from Beltran et al. 2016",
      "object": "beltran2016HCMV72",
      "file": "beltran2016HCMV72.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "beltran2016HCMV96",
      "title": "Data from Beltran et al. 2016",
      "object": "beltran2016HCMV96",
      "file": "beltran2016HCMV96.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "beltran2016MOCK120",
      "title": "Data from Beltran et al. 2016",
      "object": "beltran2016MOCK120",
      "file": "beltran2016MOCK120.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "beltran2016MOCK24",
      "title": "Data from Beltran et al. 2016",
      "object": "beltran2016MOCK24",
      "file": "beltran2016MOCK24.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "beltran2016MOCK48",
      "title": "Data from Beltran et al. 2016",
      "object": "beltran2016MOCK48",
      "file": "beltran2016MOCK48.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "beltran2016MOCK72",
      "title": "Data from Beltran et al. 2016",
      "object": "beltran2016MOCK72",
      "file": "beltran2016MOCK72.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "beltran2016MOCK96",
      "title": "Data from Beltran et al. 2016",
      "object": "beltran2016MOCK96",
      "file": "beltran2016MOCK96.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "courtland_control",
      "title": "Genetic Disruption of WASHC4 Drives Endo-lysosomal Dysfunction and Cognitive-Movement Impairments in Mice and Humans",
      "object": "courtland_control",
      "file": "courtland_control.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "courtland_mutant",
      "title": "Genetic Disruption of WASHC4 Drives Endo-lysosomal Dysfunction and Cognitive-Movement Impairments in Mice and Humans",
      "object": "courtland_mutant",
      "file": "courtland_mutant.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "davies2018ap4b1",
      "title": "AP-4 vesicles contribute to spatial control of autophagy via RUSC-dependent peripheral delivery of ATG9A",
      "object": "davies2018ap4b1",
      "file": "davies2018ap4b1.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "davies2018ap4e1",
      "title": "AP-4 vesicles contribute to spatial control of autophagy via RUSC-dependent peripheral delivery of ATG9A",
      "object": "davies2018ap4e1",
      "file": "davies2018ap4e1.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "davies2018wt",
      "title": "AP-4 vesicles contribute to spatial control of autophagy via RUSC-dependent peripheral delivery of ATG9A",
      "object": "davies2018wt",
      "file": "davies2018wt.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "dunkley2006",
      "title": "LOPIT data from Dunkley et al. (2006)",
      "object": "dunkley2006",
      "file": "dunkley2006.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "dunkley2006goCC",
      "title": "LOPIT data from Dunkley et al. (2006)",
      "object": "dunkley2006goCC",
      "file": "dunkley2006goCC.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "E14TG2aR",
      "title": "LOPIT experiment on Mouse E14TG2a Embryonic Stem Cells from Breckels et al. (2016)",
      "object": "E14TG2aR",
      "file": "E14TG2aR.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "E14TG2aS1",
      "title": "LOPIT experiment on Mouse E14TG2a Embryonic Stem Cells from Breckels et al. (2016)",
      "object": "E14TG2aS1",
      "file": "E14TG2aS1.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "E14TG2aS1goCC",
      "title": "LOPIT experiment on Mouse E14TG2a Embryonic Stem Cells from Breckels et al. (2016)",
      "object": "E14TG2aS1goCC",
      "file": "E14TG2aS1goCC.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "E14TG2aS1yLoc",
      "title": "LOPIT experiment on Mouse E14TG2a Embryonic Stem Cells from Breckels et al. (2016)",
      "object": "E14TG2aS1yLoc",
      "file": "E14TG2aS1yLoc.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "E14TG2aS2",
      "title": "LOPIT experiment on Mouse E14TG2a Embryonic Stem Cells from Breckels et al. (2016)",
      "object": "E14TG2aS2",
      "file": "E14TG2aS2.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "fabre2015r1",
      "title": "Data from Fabre et al. 2015",
      "object": "fabre2015r1",
      "file": "fabre2015r1.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "fabre2015r2",
      "title": "Data from Fabre et al. 2015",
      "object": "fabre2015r2",
      "file": "fabre2015r2.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "foster2006",
      "title": "PCP data from Foster et al. (2006)",
      "object": "foster2006",
      "file": "foster2006.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "groen2014cmb",
      "title": "LOPIT experiments on Arabidopsis thaliana roots, from Groen et al. (2014)",
      "object": "groen2014cmb",
      "file": "groen2014cmb.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "groen2014r1",
      "title": "LOPIT experiments on Arabidopsis thaliana roots, from Groen et al. (2014)",
      "object": "groen2014r1",
      "file": "groen2014r1.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "groen2014r1goCC",
      "title": "LOPIT experiments on Arabidopsis thaliana roots, from Groen et al. (2014)",
      "object": "groen2014r1goCC",
      "file": "groen2014r1goCC.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "groen2014r2",
      "title": "LOPIT experiments on Arabidopsis thaliana roots, from Groen et al. (2014)",
      "object": "groen2014r2",
      "file": "groen2014r2.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "groen2014r3",
      "title": "LOPIT experiments on Arabidopsis thaliana roots, from Groen et al. (2014)",
      "object": "groen2014r3",
      "file": "groen2014r3.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hall2009",
      "title": "LOPIT data from Hall et al. (2009)",
      "object": "hall2009",
      "file": "hall2009.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "havugimana2012",
      "title": "Data from Havugimana et al. 2012",
      "object": "havugimana2012",
      "file": "havugimana2012.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "HEK293T2011",
      "title": "LOPIT experiment on Human Embryonic Kidney fibroblast HEK293T cells from Breckels et al. (2013)",
      "object": "HEK293T2011",
      "file": "HEK293T2011.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "HEK293T2011goCC",
      "title": "LOPIT experiment on Human Embryonic Kidney fibroblast HEK293T cells from Breckels et al. (2013)",
      "object": "HEK293T2011goCC",
      "file": "HEK293T2011goCC.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "HEK293T2011hpa",
      "title": "LOPIT experiment on Human Embryonic Kidney fibroblast HEK293T cells from Breckels et al. (2013)",
      "object": "HEK293T2011hpa",
      "file": "HEK293T2011hpa.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hirst2018",
      "title": "Data from Hirst et al. 2018",
      "object": "hirst2018",
      "file": "hirst2018.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPIT2015",
      "title": "Protein and PMS-level hyperLOPIT datasets on Mouse E14TG2a embryonic stem cells from Christoforou et al. (2016).",
      "object": "hyperLOPIT2015",
      "file": "hyperLOPIT2015.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPIT2015_se",
      "title": "Protein and PMS-level hyperLOPIT datasets on Mouse E14TG2a embryonic stem cells from Christoforou et al. (2016).",
      "object": "hyperLOPIT2015_se",
      "file": "hyperLOPIT2015_se.rda",
      "class": [
        "SummarizedExperiment"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPIT2015goCC",
      "title": "Protein and PMS-level hyperLOPIT datasets on Mouse E14TG2a embryonic stem cells from Christoforou et al. (2016).",
      "object": "hyperLOPIT2015goCC",
      "file": "hyperLOPIT2015goCC.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPIT2015ms2",
      "title": "Protein and PMS-level hyperLOPIT datasets on Mouse E14TG2a embryonic stem cells from Christoforou et al. (2016).",
      "object": "hyperLOPIT2015ms2",
      "file": "hyperLOPIT2015ms2.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPIT2015ms2psm",
      "title": "Protein and PMS-level hyperLOPIT datasets on Mouse E14TG2a embryonic stem cells from Christoforou et al. (2016).",
      "object": "hyperLOPIT2015ms2psm",
      "file": "hyperLOPIT2015ms2psm.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPIT2015ms3r1",
      "title": "Protein and PMS-level hyperLOPIT datasets on Mouse E14TG2a embryonic stem cells from Christoforou et al. (2016).",
      "object": "hyperLOPIT2015ms3r1",
      "file": "hyperLOPIT2015ms3r1.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPIT2015ms3r1psm",
      "title": "Protein and PMS-level hyperLOPIT datasets on Mouse E14TG2a embryonic stem cells from Christoforou et al. (2016).",
      "object": "hyperLOPIT2015ms3r1psm",
      "file": "hyperLOPIT2015ms3r1psm.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPIT2015ms3r2",
      "title": "Protein and PMS-level hyperLOPIT datasets on Mouse E14TG2a embryonic stem cells from Christoforou et al. (2016).",
      "object": "hyperLOPIT2015ms3r2",
      "file": "hyperLOPIT2015ms3r2.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPIT2015ms3r2psm",
      "title": "Protein and PMS-level hyperLOPIT datasets on Mouse E14TG2a embryonic stem cells from Christoforou et al. (2016).",
      "object": "hyperLOPIT2015ms3r2psm",
      "file": "hyperLOPIT2015ms3r2psm.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPIT2015ms3r3",
      "title": "Protein and PMS-level hyperLOPIT datasets on Mouse E14TG2a embryonic stem cells from Christoforou et al. (2016).",
      "object": "hyperLOPIT2015ms3r3",
      "file": "hyperLOPIT2015ms3r3.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPITU2OS2017",
      "title": "2017 and 2018 hyperLOPIT on U2OS cells",
      "object": "hyperLOPITU2OS2017",
      "file": "hyperLOPITU2OS2017.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPITU2OS2017b",
      "title": "2017 and 2018 hyperLOPIT on U2OS cells",
      "object": "hyperLOPITU2OS2017b",
      "file": "hyperLOPITU2OS2017b.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "hyperLOPITU2OS2018",
      "title": "2017 and 2018 hyperLOPIT on U2OS cells",
      "object": "hyperLOPITU2OS2018",
      "file": "hyperLOPITU2OS2018.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "itzhak2016helaCtrl",
      "title": "Global, quantitative and dynamic mapping of protein subcellular localization",
      "object": "itzhak2016helaCtrl",
      "file": "itzhak2016helaCtrl.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "itzhak2016helaEgf",
      "title": "Global, quantitative and dynamic mapping of protein subcellular localization",
      "object": "itzhak2016helaEgf",
      "file": "itzhak2016helaEgf.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "itzhak2016stcSILAC",
      "title": "Data from Itzhak et al. (2016)",
      "object": "itzhak2016stcSILAC",
      "file": "itzhak2016stcSILAC.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "itzhak2017",
      "title": "Data from Itzhak et al. 2017",
      "object": "itzhak2017",
      "file": "itzhak2017.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "itzhak2017markers",
      "title": "Data from Itzhak et al. 2017",
      "object": "itzhak2017markers",
      "file": "itzhak2017markers.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "kirkwood2013",
      "title": "Data from Kirkwood et al. 2013.",
      "object": "kirkwood2013",
      "file": "kirkwood2013.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Kozik_con",
      "title": "Small molecule enhancers of endosome-to-cytosol import augment anti-tumour immunity",
      "object": "Kozik_con",
      "file": "Kozik_con.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Kozik_pra",
      "title": "Small molecule enhancers of endosome-to-cytosol import augment anti-tumour immunity",
      "object": "Kozik_pra",
      "file": "Kozik_pra.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Kozik_tam",
      "title": "Small molecule enhancers of endosome-to-cytosol import augment anti-tumour immunity",
      "object": "Kozik_tam",
      "file": "Kozik_tam.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "krahmer2018pcp",
      "title": "Subcellular Reorganization in Diet-Induced Hepatic Steatosis",
      "object": "krahmer2018pcp",
      "file": "krahmer2018pcp.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "krahmer2018phosphopcp",
      "title": "Subcellular Reorganization in Diet-Induced Hepatic Steatosis",
      "object": "krahmer2018phosphopcp",
      "file": "krahmer2018phosphopcp.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "kristensen2012r1",
      "title": "Data from Kristensen et al. 2012",
      "object": "kristensen2012r1",
      "file": "kristensen2012r1.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "kristensen2012r2",
      "title": "Data from Kristensen et al. 2012",
      "object": "kristensen2012r2",
      "file": "kristensen2012r2.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "kristensen2012r3",
      "title": "Data from Kristensen et al. 2012",
      "object": "kristensen2012r3",
      "file": "kristensen2012r3.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "lopimsSyn1",
      "title": "LOPIMS data for the Synapter 2.0 paper",
      "object": "lopimsSyn1",
      "file": "lopimsSyn1.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "lopimsSyn2",
      "title": "LOPIMS data for the Synapter 2.0 paper",
      "object": "lopimsSyn2",
      "file": "lopimsSyn2.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "lopimsSyn2_0frags",
      "title": "LOPIMS data for the Synapter 2.0 paper",
      "object": "lopimsSyn2_0frags",
      "file": "lopimsSyn2_0frags.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "lopitdcU2OS2018",
      "title": "2017 and 2018 hyperLOPIT on U2OS cells",
      "object": "lopitdcU2OS2018",
      "file": "lopitdcU2OS2018.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "lpsTimecourse_mulvey2021",
      "title": "Protein and PMS-level datasets from temporal abundance profiling experiments of THP-1 human leukaema cells stimulated with LPS",
      "object": "lpsTimecourse_mulvey2021",
      "file": "lpsTimecourse_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "lpsTimecourse_rep1_mulvey2021",
      "title": "Protein and PMS-level datasets from temporal abundance profiling experiments of THP-1 human leukaema cells stimulated with LPS",
      "object": "lpsTimecourse_rep1_mulvey2021",
      "file": "lpsTimecourse_rep1_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "lpsTimecourse_rep2_mulvey2021",
      "title": "Protein and PMS-level datasets from temporal abundance profiling experiments of THP-1 human leukaema cells stimulated with LPS",
      "object": "lpsTimecourse_rep2_mulvey2021",
      "file": "lpsTimecourse_rep2_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "lpsTimecourse_rep3_mulvey2021",
      "title": "Protein and PMS-level datasets from temporal abundance profiling experiments of THP-1 human leukaema cells stimulated with LPS",
      "object": "lpsTimecourse_rep3_mulvey2021",
      "file": "lpsTimecourse_rep3_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "moloneyTbBSF",
      "title": "Spatial proteomics datasets from two African trypanosome species",
      "object": "moloneyTbBSF",
      "file": "moloneyTbBSF.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "moloneyTbPCF",
      "title": "Spatial proteomics datasets from two African trypanosome species",
      "object": "moloneyTbPCF",
      "file": "moloneyTbPCF.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "moloneyTcBSF",
      "title": "Spatial proteomics datasets from two African trypanosome species",
      "object": "moloneyTcBSF",
      "file": "moloneyTcBSF.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "moloneyTcPCF",
      "title": "Spatial proteomics datasets from two African trypanosome species",
      "object": "moloneyTcPCF",
      "file": "moloneyTcPCF.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "mulvey2015",
      "title": "Data from Mulvey et al. 2015",
      "object": "mulvey2015",
      "file": "mulvey2015.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "mulvey2015_se",
      "title": "Data from Mulvey et al. 2015",
      "object": "mulvey2015_se",
      "file": "mulvey2015_se.rda",
      "class": [
        "SummarizedExperiment"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "mulvey2015norm",
      "title": "Data from Mulvey et al. 2015",
      "object": "mulvey2015norm",
      "file": "mulvey2015norm.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "mulvey2015norm_se",
      "title": "Data from Mulvey et al. 2015",
      "object": "mulvey2015norm_se",
      "file": "mulvey2015norm_se.rda",
      "class": [
        "SummarizedExperiment"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "nikolovski2012",
      "title": "Meta-analysis from Nikolovski et al. (2012)",
      "object": "nikolovski2012",
      "file": "nikolovski2012.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "nikolovski2012imp",
      "title": "Meta-analysis from Nikolovski et al. (2012)",
      "object": "nikolovski2012imp",
      "file": "nikolovski2012imp.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "nikolovski2014",
      "title": "LOPIMS data from Nikolovski et al. (2014)",
      "object": "nikolovski2014",
      "file": "nikolovski2014.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "orre2019a431",
      "title": "SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization",
      "object": "orre2019a431",
      "file": "orre2019a431.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "orre2019h322",
      "title": "SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization",
      "object": "orre2019h322",
      "file": "orre2019h322.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "orre2019hcc827",
      "title": "SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization",
      "object": "orre2019hcc827",
      "file": "orre2019hcc827.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "orre2019hcc827gef",
      "title": "SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization",
      "object": "orre2019hcc827gef",
      "file": "orre2019hcc827gef.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "orre2019hcc827rep1",
      "title": "SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization",
      "object": "orre2019hcc827rep1",
      "file": "orre2019hcc827rep1.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "orre2019hcc827rep2",
      "title": "SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization",
      "object": "orre2019hcc827rep2",
      "file": "orre2019hcc827rep2.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "orre2019hcc827rep3",
      "title": "SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization",
      "object": "orre2019hcc827rep3",
      "file": "orre2019hcc827rep3.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "orre2019mcf7",
      "title": "SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization",
      "object": "orre2019mcf7",
      "file": "orre2019mcf7.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "orre2019u251",
      "title": "SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization",
      "object": "orre2019u251",
      "file": "orre2019u251.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_lpsTimecourse_rep1_mulvey2021",
      "title": "Protein and PMS-level datasets from temporal abundance profiling experiments of THP-1 human leukaema cells stimulated with LPS",
      "object": "psms_lpsTimecourse_rep1_mulvey2021",
      "file": "psms_lpsTimecourse_rep1_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_lpsTimecourse_rep2_mulvey2021",
      "title": "Protein and PMS-level datasets from temporal abundance profiling experiments of THP-1 human leukaema cells stimulated with LPS",
      "object": "psms_lpsTimecourse_rep2_mulvey2021",
      "file": "psms_lpsTimecourse_rep2_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_lpsTimecourse_rep3_mulvey2021",
      "title": "Protein and PMS-level datasets from temporal abundance profiling experiments of THP-1 human leukaema cells stimulated with LPS",
      "object": "psms_lpsTimecourse_rep3_mulvey2021",
      "file": "psms_lpsTimecourse_rep3_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_lps_rep1_set1",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_lps_rep1_set1",
      "file": "psms_thpLOPIT_lps_rep1_set1.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_lps_rep1_set2",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_lps_rep1_set2",
      "file": "psms_thpLOPIT_lps_rep1_set2.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_lps_rep2_set1",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_lps_rep2_set1",
      "file": "psms_thpLOPIT_lps_rep2_set1.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_lps_rep2_set2",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_lps_rep2_set2",
      "file": "psms_thpLOPIT_lps_rep2_set2.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_lps_rep3_set1",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_lps_rep3_set1",
      "file": "psms_thpLOPIT_lps_rep3_set1.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_lps_rep3_set2",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_lps_rep3_set2",
      "file": "psms_thpLOPIT_lps_rep3_set2.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_unstim_rep1_set1",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_unstim_rep1_set1",
      "file": "psms_thpLOPIT_unstim_rep1_set1.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_unstim_rep1_set2",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_unstim_rep1_set2",
      "file": "psms_thpLOPIT_unstim_rep1_set2.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_unstim_rep2_set1",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_unstim_rep2_set1",
      "file": "psms_thpLOPIT_unstim_rep2_set1.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_unstim_rep2_set2",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_unstim_rep2_set2",
      "file": "psms_thpLOPIT_unstim_rep2_set2.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_unstim_rep3_set1",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_unstim_rep3_set1",
      "file": "psms_thpLOPIT_unstim_rep3_set1.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "psms_thpLOPIT_unstim_rep3_set2",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "psms_thpLOPIT_unstim_rep3_set2",
      "file": "psms_thpLOPIT_unstim_rep3_set2.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "rodriguez2012r1",
      "title": "Spatial proteomics of human inducible goblet-like LS174T cells from Rodriguez-Pineiro et al. (2012)",
      "object": "rodriguez2012r1",
      "file": "rodriguez2012r1.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "rodriguez2012r2",
      "title": "Spatial proteomics of human inducible goblet-like LS174T cells from Rodriguez-Pineiro et al. (2012)",
      "object": "rodriguez2012r2",
      "file": "rodriguez2012r2.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "rodriguez2012r3",
      "title": "Spatial proteomics of human inducible goblet-like LS174T cells from Rodriguez-Pineiro et al. (2012)",
      "object": "rodriguez2012r3",
      "file": "rodriguez2012r3.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Shin2019MitoControlrep1",
      "title": "Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers",
      "object": "Shin2019MitoControlrep1",
      "file": "Shin2019MitoControlrep1.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Shin2019MitoControlrep2",
      "title": "Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers",
      "object": "Shin2019MitoControlrep2",
      "file": "Shin2019MitoControlrep2.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Shin2019MitoControlrep3",
      "title": "Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers",
      "object": "Shin2019MitoControlrep3",
      "file": "Shin2019MitoControlrep3.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Shin2019MitoGcc88rep1",
      "title": "Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers",
      "object": "Shin2019MitoGcc88rep1",
      "file": "Shin2019MitoGcc88rep1.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Shin2019MitoGcc88rep2",
      "title": "Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers",
      "object": "Shin2019MitoGcc88rep2",
      "file": "Shin2019MitoGcc88rep2.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Shin2019MitoGcc88rep3",
      "title": "Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers",
      "object": "Shin2019MitoGcc88rep3",
      "file": "Shin2019MitoGcc88rep3.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Shin2019MitoGol97rep1",
      "title": "Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers",
      "object": "Shin2019MitoGol97rep1",
      "file": "Shin2019MitoGol97rep1.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Shin2019MitoGol97rep2",
      "title": "Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers",
      "object": "Shin2019MitoGol97rep2",
      "file": "Shin2019MitoGol97rep2.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Shin2019MitoGol97rep3",
      "title": "Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers",
      "object": "Shin2019MitoGol97rep3",
      "file": "Shin2019MitoGol97rep3.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "stekhoven2014",
      "title": "Data from Stekhoven et al. 2014",
      "object": "stekhoven2014",
      "file": "stekhoven2014.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "tan2009r1",
      "title": "LOPIT data from Tan et al. (2009)",
      "object": "tan2009r1",
      "file": "tan2009r1.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "tan2009r1goCC",
      "title": "LOPIT data from Tan et al. (2009)",
      "object": "tan2009r1goCC",
      "file": "tan2009r1goCC.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "tan2009r2",
      "title": "LOPIT data from Tan et al. (2009)",
      "object": "tan2009r2",
      "file": "tan2009r2.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "tan2009r3",
      "title": "LOPIT data from Tan et al. (2009)",
      "object": "tan2009r3",
      "file": "tan2009r3.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "thpLOPIT_lps_mulvey2021",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "thpLOPIT_lps_mulvey2021",
      "file": "thpLOPIT_lps_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "thpLOPIT_lps_rep1_mulvey2021",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "thpLOPIT_lps_rep1_mulvey2021",
      "file": "thpLOPIT_lps_rep1_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "thpLOPIT_lps_rep2_mulvey2021",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "thpLOPIT_lps_rep2_mulvey2021",
      "file": "thpLOPIT_lps_rep2_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "thpLOPIT_lps_rep3_mulvey2021",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "thpLOPIT_lps_rep3_mulvey2021",
      "file": "thpLOPIT_lps_rep3_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "thpLOPIT_unstimulated_mulvey2021",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "thpLOPIT_unstimulated_mulvey2021",
      "file": "thpLOPIT_unstimulated_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "thpLOPIT_unstimulated_rep1_mulvey2021",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "thpLOPIT_unstimulated_rep1_mulvey2021",
      "file": "thpLOPIT_unstimulated_rep1_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "thpLOPIT_unstimulated_rep2_mulvey2021",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "thpLOPIT_unstimulated_rep2_mulvey2021",
      "file": "thpLOPIT_unstimulated_rep2_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "thpLOPIT_unstimulated_rep3_mulvey2021",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "object": "thpLOPIT_unstimulated_rep3_mulvey2021",
      "file": "thpLOPIT_unstimulated_rep3_mulvey2021.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "trotter2010",
      "title": "LOPIT data sets used in Trotter et al. (2010)",
      "object": "trotter2010",
      "file": "trotter2010.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "trotter2010shallow",
      "title": "LOPIT data sets used in Trotter et al. (2010)",
      "object": "trotter2010shallow",
      "file": "trotter2010shallow.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "trotter2010steep",
      "title": "LOPIT data sets used in Trotter et al. (2010)",
      "object": "trotter2010steep",
      "file": "trotter2010steep.rda",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "yeast2018",
      "title": "Saccharomyces cerevisiae spatial proteomics (2018)",
      "object": "yeast2018",
      "file": "yeast2018.RData",
      "class": [
        "MSnSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "andreyev2010",
      "title": "Six sub-cellular fraction data from mouse macrophage-like RAW264.7 cells from Andreyev et al. (2009)",
      "topics": [
        "andreyev2010",
        "andreyev2010activ",
        "andreyev2010rest"
      ]
    },
    {
      "page": "andy2011",
      "title": "LOPIT experiment on Human Embryonic Kidney fibroblast HEK293T cells from Breckels et al. (2013)",
      "topics": [
        "andy2011",
        "andy2011goCC",
        "andy2011hpa",
        "HEK293T2011",
        "HEK293T2011goCC",
        "HEK293T2011hpa"
      ]
    },
    {
      "page": "at_chloro",
      "title": "The AT_CHLORO data base",
      "topics": [
        "at_chloro"
      ]
    },
    {
      "page": "baers2018",
      "title": "Synechocystis spatial proteomics",
      "topics": [
        "baers2018",
        "synechocystis"
      ]
    },
    {
      "page": "beltran2016",
      "title": "Data from Beltran et al. 2016",
      "topics": [
        "beltran2016",
        "beltran2016HCMV120",
        "beltran2016HCMV24",
        "beltran2016HCMV48",
        "beltran2016HCMV72",
        "beltran2016HCMV96",
        "beltran2016MOCK120",
        "beltran2016MOCK24",
        "beltran2016MOCK48",
        "beltran2016MOCK72",
        "beltran2016MOCK96"
      ]
    },
    {
      "page": "courtland2020",
      "title": "Genetic Disruption of WASHC4 Drives Endo-lysosomal Dysfunction and Cognitive-Movement Impairments in Mice and Humans",
      "topics": [
        "courtland_control",
        "courtland_mutant"
      ]
    },
    {
      "page": "davies2018",
      "title": "AP-4 vesicles contribute to spatial control of autophagy via RUSC-dependent peripheral delivery of ATG9A",
      "topics": [
        "davies2018ap4b1",
        "davies2018ap4e1",
        "davies2018wt"
      ]
    },
    {
      "page": "dunkley2006",
      "title": "LOPIT data from Dunkley et al. (2006)",
      "topics": [
        "dunkley2006",
        "dunkley2006goCC"
      ]
    },
    {
      "page": "E14TG2a",
      "title": "LOPIT experiment on Mouse E14TG2a Embryonic Stem Cells from Breckels et al. (2016)",
      "topics": [
        "E14TG2a",
        "E14TG2aR",
        "E14TG2aS1",
        "E14TG2aS1goCC",
        "E14TG2aS1yLoc",
        "E14TG2aS2"
      ]
    },
    {
      "page": "fabre2015",
      "title": "Data from Fabre et al. 2015",
      "topics": [
        "fabre2015",
        "fabre2015r1",
        "fabre2015r2"
      ]
    },
    {
      "page": "foster2006",
      "title": "PCP data from Foster et al. (2006)",
      "topics": [
        "foster2006"
      ]
    },
    {
      "page": "groen2014",
      "title": "LOPIT experiments on Arabidopsis thaliana roots, from Groen et al. (2014)",
      "topics": [
        "groen2014",
        "groen2014cmb",
        "groen2014r1",
        "groen2014r1goCC",
        "groen2014r2",
        "groen2014r3"
      ]
    },
    {
      "page": "hall2009",
      "title": "LOPIT data from Hall et al. (2009)",
      "topics": [
        "hall2009"
      ]
    },
    {
      "page": "havugimana2012",
      "title": "Data from Havugimana et al. 2012",
      "topics": [
        "havugimana2012"
      ]
    },
    {
      "page": "hirst2018",
      "title": "Data from Hirst et al. 2018",
      "topics": [
        "hirst2018"
      ]
    },
    {
      "page": "hyperLOPIT2015",
      "title": "Protein and PMS-level hyperLOPIT datasets on Mouse E14TG2a embryonic stem cells from Christoforou et al. (2016).",
      "topics": [
        "hyperLOPIT2015",
        "hyperLOPIT2015goCC",
        "hyperLOPIT2015ms2",
        "hyperLOPIT2015ms2psm",
        "hyperLOPIT2015ms3r1",
        "hyperLOPIT2015ms3r1psm",
        "hyperLOPIT2015ms3r2",
        "hyperLOPIT2015ms3r2psm",
        "hyperLOPIT2015ms3r3",
        "hyperLOPIT2015_se"
      ]
    },
    {
      "page": "hyperLOPITU2OS2017",
      "title": "2017 and 2018 hyperLOPIT on U2OS cells",
      "topics": [
        "hyperLOPITU2OS2017",
        "hyperLOPITU2OS2017b",
        "hyperLOPITU2OS2018",
        "lopitdcU2OS2018",
        "U2OS"
      ]
    },
    {
      "page": "itzhak2016stcSILAC",
      "title": "Data from Itzhak et al. (2016)",
      "topics": [
        "itzhak2016stcSILAC"
      ]
    },
    {
      "page": "itzhak2017dynamic",
      "title": "Global, quantitative and dynamic mapping of protein subcellular localization",
      "topics": [
        "itzhak2016helaCtrl",
        "itzhak2016helaEgf"
      ]
    },
    {
      "page": "itzhak2017",
      "title": "Data from Itzhak et al. 2017",
      "topics": [
        "itzhak2017",
        "itzhak2017markers"
      ]
    },
    {
      "page": "kirkwood2013",
      "title": "Data from Kirkwood et al. 2013.",
      "topics": [
        "kirkwood2013"
      ]
    },
    {
      "page": "kozik2020",
      "title": "Small molecule enhancers of endosome-to-cytosol import augment anti-tumour immunity",
      "topics": [
        "Kozik_con",
        "Kozik_pra",
        "Kozik_tam"
      ]
    },
    {
      "page": "krahmer2018pcp",
      "title": "Subcellular Reorganization in Diet-Induced Hepatic Steatosis",
      "topics": [
        "krahmer2018pcp",
        "krahmer2018phosphopcp"
      ]
    },
    {
      "page": "kristensen2012",
      "title": "Data from Kristensen et al. 2012",
      "topics": [
        "kristensen2012",
        "kristensen2012r1",
        "kristensen2012r2",
        "kristensen2012r3"
      ]
    },
    {
      "page": "lopimsSyn2",
      "title": "LOPIMS data for the Synapter 2.0 paper",
      "topics": [
        "lopimsSyn1",
        "lopimsSyn2",
        "lopimsSyn2_0frags"
      ]
    },
    {
      "page": "thpTimecourse2021",
      "title": "Protein and PMS-level datasets from temporal abundance profiling experiments of THP-1 human leukaema cells stimulated with LPS",
      "topics": [
        "lpsTimecourse_mulvey2021",
        "lpsTimecourse_rep1_mulvey2021",
        "lpsTimecourse_rep2_mulvey2021",
        "lpsTimecourse_rep3_mulvey2021",
        "psms_lpsTimecourse_rep1_mulvey2021",
        "psms_lpsTimecourse_rep2_mulvey2021",
        "psms_lpsTimecourse_rep3_mulvey2021"
      ]
    },
    {
      "page": "moloney2023",
      "title": "Spatial proteomics datasets from two African trypanosome species",
      "topics": [
        "moloneyTbBSF",
        "moloneyTbPCF",
        "moloneyTcBSF",
        "moloneyTcPCF"
      ]
    },
    {
      "page": "mulvey2015",
      "title": "Data from Mulvey et al. 2015",
      "topics": [
        "mulvey2015",
        "mulvey2015norm",
        "mulvey2015norm_se",
        "mulvey2015_se"
      ]
    },
    {
      "page": "nikolovski2012",
      "title": "Meta-analysis from Nikolovski et al. (2012)",
      "topics": [
        "nikolovski2012",
        "nikolovski2012imp"
      ]
    },
    {
      "page": "nikolovski2014",
      "title": "LOPIMS data from Nikolovski et al. (2014)",
      "topics": [
        "nikolovski2014"
      ]
    },
    {
      "page": "orre2019",
      "title": "SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization",
      "topics": [
        "orre2019a431",
        "orre2019h322",
        "orre2019hcc827",
        "orre2019hcc827gef",
        "orre2019hcc827rep1",
        "orre2019hcc827rep2",
        "orre2019hcc827rep3",
        "orre2019mcf7",
        "orre2019u251"
      ]
    },
    {
      "page": "pRolocdata",
      "title": "List of pRolocdata data sets",
      "topics": [
        "pRolocdata"
      ]
    },
    {
      "page": "pRolocmetadata",
      "title": "Extract pRoloc metadata",
      "topics": [
        "print.pRolocmetadata",
        "pRolocmetadata"
      ]
    },
    {
      "page": "rodriguez2012r1",
      "title": "Spatial proteomics of human inducible goblet-like LS174T cells from Rodriguez-Pineiro et al. (2012)",
      "topics": [
        "rodriguez-pineiro2012",
        "rodriguez2012",
        "rodriguez2012r1",
        "rodriguez2012r2",
        "rodriguez2012r3"
      ]
    },
    {
      "page": "Shin2020",
      "title": "Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers",
      "topics": [
        "Shin2019MitoControlrep1",
        "Shin2019MitoControlrep2",
        "Shin2019MitoControlrep3",
        "Shin2019MitoGcc88rep1",
        "Shin2019MitoGcc88rep2",
        "Shin2019MitoGcc88rep3",
        "Shin2019MitoGol97rep1",
        "Shin2019MitoGol97rep2",
        "Shin2019MitoGol97rep3"
      ]
    },
    {
      "page": "stekhoven2014",
      "title": "Data from Stekhoven et al. 2014",
      "topics": [
        "stekhoven2014"
      ]
    },
    {
      "page": "tan2009",
      "title": "LOPIT data from Tan et al. (2009)",
      "topics": [
        "tan2009",
        "tan2009r1",
        "tan2009r1goCC",
        "tan2009r2",
        "tan2009r3"
      ]
    },
    {
      "page": "thpLOPIT2021",
      "title": "Protein and PMS-level hyperLOPIT datasets from THP-1 human leukaema cells",
      "topics": [
        "psms_thpLOPIT_lps_rep1_set1",
        "psms_thpLOPIT_lps_rep1_set2",
        "psms_thpLOPIT_lps_rep2_set1",
        "psms_thpLOPIT_lps_rep2_set2",
        "psms_thpLOPIT_lps_rep3_set1",
        "psms_thpLOPIT_lps_rep3_set2",
        "psms_thpLOPIT_unstim_rep1_set1",
        "psms_thpLOPIT_unstim_rep1_set2",
        "psms_thpLOPIT_unstim_rep2_set1",
        "psms_thpLOPIT_unstim_rep2_set2",
        "psms_thpLOPIT_unstim_rep3_set1",
        "psms_thpLOPIT_unstim_rep3_set2",
        "thpLOPIT_lps_mulvey2021",
        "thpLOPIT_lps_rep1_mulvey2021",
        "thpLOPIT_lps_rep2_mulvey2021",
        "thpLOPIT_lps_rep3_mulvey2021",
        "thpLOPIT_unstimulated_mulvey2021",
        "thpLOPIT_unstimulated_rep1_mulvey2021",
        "thpLOPIT_unstimulated_rep2_mulvey2021",
        "thpLOPIT_unstimulated_rep3_mulvey2021"
      ]
    },
    {
      "page": "ToxoLopit",
      "title": "Whole-cell spatial proteome of Toxoplasma: molecular anatomy of an apicomplexan cell",
      "topics": [
        "Barylyuk2020ToxoLopit"
      ]
    },
    {
      "page": "trotter2010",
      "title": "LOPIT data sets used in Trotter et al. (2010)",
      "topics": [
        "trotter2010",
        "trotter2010shallow",
        "trotter2010steep"
      ]
    },
    {
      "page": "yeast",
      "title": "Saccharomyces cerevisiae spatial proteomics (2018)",
      "topics": [
        "yeast2018"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/pRolocdata/raw/RELEASE_3_23/README.md",
  "_rundeps": [
    "abind",
    "affy",
    "affyio",
    "AnnotationFilter",
    "askpass",
    "base64enc",
    "BH",
    "Biobase",
    "BiocBaseUtils",
    "BiocGenerics",
    "biocmake",
    "BiocManager",
    "BiocParallel",
    "bslib",
    "cachem",
    "cli",
    "clue",
    "cluster",
    "codetools",
    "cpp11",
    "crosstalk",
    "curl",
    "data.table",
    "DelayedArray",
    "digest",
    "dir.expiry",
    "doParallel",
    "dplyr",
    "evaluate",
    "farver",
    "fastmap",
    "filelock",
    "fontawesome",
    "foreach",
    "formatR",
    "fs",
    "futile.logger",
    "futile.options",
    "generics",
    "GenomicRanges",
    "ggplot2",
    "glue",
    "gtable",
    "highr",
    "htmltools",
    "htmlwidgets",
    "httr",
    "igraph",
    "impute",
    "IRanges",
    "isoband",
    "iterators",
    "jquerylib",
    "jsonlite",
    "knitr",
    "labeling",
    "lambda.r",
    "later",
    "lattice",
    "lazyeval",
    "lifecycle",
    "limma",
    "magrittr",
    "MALDIquant",
    "MASS",
    "Matrix",
    "MatrixGenerics",
    "matrixStats",
    "memoise",
    "MetaboCoreUtils",
    "mime",
    "MsCoreUtils",
    "MSnbase",
    "MultiAssayExperiment",
    "mzID",
    "mzR",
    "ncdf4",
    "openssl",
    "otel",
    "pcaMethods",
    "pillar",
    "pkgconfig",
    "plotly",
    "plyr",
    "preprocessCore",
    "promises",
    "ProtGenerics",
    "PSMatch",
    "PTMods",
    "purrr",
    "QFeatures",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "reshape2",
    "Rhdf5lib",
    "rlang",
    "rmarkdown",
    "S4Arrays",
    "S4Vectors",
    "S7",
    "sass",
    "scales",
    "Seqinfo",
    "snow",
    "SparseArray",
    "Spectra",
    "statmod",
    "stringi",
    "stringr",
    "SummarizedExperiment",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "tinytex",
    "utf8",
    "vctrs",
    "viridisLite",
    "vsn",
    "withr",
    "xfun",
    "XML",
    "XVector",
    "yaml"
  ],
  "_score": 6.9170851906405675,
  "_indexed": false,
  "_nocasepkg": "prolocdata",
  "_universes": [
    "bioc-release"
  ],
  "_indexurl": "https://bioc.r-universe.dev/pRolocdata",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.50.0",
      "date": "2026-10-13T13:47:05.000Z",
      "distro": "resolute",
      "commit": "2ae05319215a5f54b29cf5ae0ddf4ba4f0635c9d",
      "fileid": "https://r2.ropensci.org/c6b8da63a14403b5566756869c9ce21e0fba127d4a0183a234b7665bf199ba47",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38405584665"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.50.0",
      "date": "2026-10-13T13:46:57.000Z",
      "distro": "resolute",
      "commit": "2ae05319215a5f54b29cf5ae0ddf4ba4f0635c9d",
      "fileid": "https://r2.ropensci.org/c922077f9ba93b2dcb3f9809a3f65826d563ba190adca0b7b962ec45b1c87ac4",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38405584665"
    }
  ]
}