{
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  "Package": "scRNAseq",
  "Title": "Collection of Public Single-Cell RNA-Seq Datasets",
  "Version": "2.26.0",
  "Date": "2025-10-10",
  "Authors@R": "c(\nperson(\"Davide\", \"Risso\", email = \"risso.davide@gmail.com\", role = c(\"aut\", \"cph\")),\nperson(\"Michael\", \"Cole\", role=\"aut\"),\nperson(\"Aaron\", \"Lun\", role=c(\"ctb\", \"cre\"), email=\"infinite.monkeys.with.keyboards@gmail.com\"),\nperson(\"Alan\", \"O'Callaghan\", role=\"ctb\"),\nperson(\"Jens\", \"Preussner\", role=\"ctb\"),\nperson(\"Charlotte\", \"Soneson\", role=\"ctb\"),\nperson(\"Stephany\", \"Orjuela\", role=\"ctb\"),\nperson(\"Daniel\", \"Bunis\", role=\"ctb\"),\nperson(\"Milan\", \"Malfait\", role=\"ctb\"))",
  "Description": "Gene-level counts for a collection of public scRNA-seq\ndatasets, provided as SingleCellExperiment objects with cell-\nand gene-level metadata.",
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  "Repository": "Bioconductor 3.23",
  "Date/Publication": "2026-04-28 12:30:07 UTC",
  "RemoteUrl": "https://github.com/bioc/scRNAseq",
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  "Author": "Davide Risso [aut, cph],\nMichael Cole [aut],\nAaron Lun [ctb, cre],\nAlan O'Callaghan [ctb],\nJens Preussner [ctb],\nCharlotte Soneson [ctb],\nStephany Orjuela [ctb],\nDaniel Bunis [ctb],\nMilan Malfait [ctb]",
  "Maintainer": "Aaron Lun <infinite.monkeys.with.keyboards@gmail.com>",
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  "_created": "2026-10-10T11:11:10.000Z",
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  "_upstream": "https://github.com/bioc/scRNAseq",
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    "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n",
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    "BachMammaryData",
    "BaronPancreasData",
    "BhaduriOrganoidData",
    "BuettnerESCData",
    "BunisHSPCData",
    "CampbellBrainData",
    "ChenBrainData",
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    "ErnstSpermatogenesisData",
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    "NowakowskiCortexData",
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    "polishDataset",
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    "ReprocessedAllenData",
    "ReprocessedFluidigmData",
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    "ZhongPrefrontalData",
    "ZilionisLungData"
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    {
      "page": "scRNAseq-package",
      "title": "Collection of Public Single-Cell RNA-Seq Datasets",
      "topics": [
        "scRNAseq-package",
        "allen",
        "fluidigm",
        "scRNAseq",
        "th2"
      ]
    },
    {
      "page": "AztekinTailData",
      "title": "Obtain the Aztekin tail data",
      "topics": [
        "AztekinTailData"
      ]
    },
    {
      "page": "BacherTCellData",
      "title": "Obtain the Bacher T cell data",
      "topics": [
        "BacherTCellData"
      ]
    },
    {
      "page": "BachMammaryData",
      "title": "Obtain the Bach mammary data",
      "topics": [
        "BachMammaryData"
      ]
    },
    {
      "page": "BaronPancreasData",
      "title": "Obtain the Baron pancreas data",
      "topics": [
        "BaronPancreasData"
      ]
    },
    {
      "page": "BhaduriOrganoidData",
      "title": "Obtain the Bhaduri cortical organoid data",
      "topics": [
        "BhaduriOrganoidData"
      ]
    },
    {
      "page": "BuettnerESCData",
      "title": "Obtain the Buettner ESC data",
      "topics": [
        "BuettnerESCData"
      ]
    },
    {
      "page": "BunisHSPCData",
      "title": "Obtain the Bunis haematopoietic stem and progenitor cell data",
      "topics": [
        "BunisHSPCData"
      ]
    },
    {
      "page": "CampbellBrainData",
      "title": "Obtain the Campbell brain data",
      "topics": [
        "CampbellBrainData"
      ]
    },
    {
      "page": "ChenBrainData",
      "title": "Obtain the Chen brain data",
      "topics": [
        "ChenBrainData"
      ]
    },
    {
      "page": "countErccMolecules",
      "title": "Obtain ERCC molecule counts from concentrations",
      "topics": [
        "countErccMolecules"
      ]
    },
    {
      "page": "DarmanisBrainData",
      "title": "Obtain the Darmanis brain data",
      "topics": [
        "DarmanisBrainData"
      ]
    },
    {
      "page": "ERCCSpikeInConcentrations",
      "title": "Obtain ERCC concentrations",
      "topics": [
        "ERCCSpikeInConcentrations"
      ]
    },
    {
      "page": "ErnstSpermatogenesisData",
      "title": "Obtain the Ernst spermatogenesis data",
      "topics": [
        "ErnstSpermatogenesisData"
      ]
    },
    {
      "page": "fetchDataset",
      "title": "Fetch a dataset from the gypsum backend",
      "topics": [
        "fetchDataset",
        "fetchMetadata"
      ]
    },
    {
      "page": "FletcherOlfactoryData",
      "title": "Obtain the Fletcher Olfactory data",
      "topics": [
        "FletcherOlfactoryData"
      ]
    },
    {
      "page": "GiladiHSCData",
      "title": "Obtain the Giladi HSC data",
      "topics": [
        "GiladiHSCData"
      ]
    },
    {
      "page": "GrunHSCData",
      "title": "Obtain the Grun HSC data",
      "topics": [
        "GrunHSCData"
      ]
    },
    {
      "page": "GrunPancreasData",
      "title": "Obtain the Grun pancreas data",
      "topics": [
        "GrunPancreasData"
      ]
    },
    {
      "page": "HeOrganAtlasData",
      "title": "Obtain the He organ atlas data",
      "topics": [
        "HeOrganAtlasData"
      ]
    },
    {
      "page": "HermannSpermatogenesisData",
      "title": "Obtain the Hermann spermatogenesis data",
      "topics": [
        "HermannSpermatogenesisData"
      ]
    },
    {
      "page": "HuCortexData",
      "title": "Obtain the Hu cortex data",
      "topics": [
        "HuCortexData"
      ]
    },
    {
      "page": "JessaBrainData",
      "title": "Obtain the Jessa brain data",
      "topics": [
        "JessaBrainData"
      ]
    },
    {
      "page": "KolodziejczykESCData",
      "title": "Obtain the Kolodziejcyzk ESC data",
      "topics": [
        "KolodziejczykESCData"
      ]
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    {
      "page": "KotliarovPBMCData",
      "title": "Obtain the Kotliarov CITE-seq data",
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      ]
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    {
      "page": "LaMannoBrainData",
      "title": "Obtain the La Manno brain data",
      "topics": [
        "LaMannoBrainData"
      ]
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    {
      "page": "LawlorPancreasData",
      "title": "Obtain the Lawlor pancreas data",
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        "LawlorPancreasData"
      ]
    },
    {
      "page": "LedergorMyelomaData",
      "title": "Obtain the Ledergor Myeloma data",
      "topics": [
        "LedergorMyelomaData"
      ]
    },
    {
      "page": "LengESCData",
      "title": "Obtain the Leng ESC data",
      "topics": [
        "LengESCData"
      ]
    },
    {
      "page": "listDatasets",
      "title": "List all available datasets",
      "topics": [
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      ]
    },
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      "page": "listPaths",
      "title": "List all paths for a dataset",
      "topics": [
        "listPaths"
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    },
    {
      "page": "listVersions",
      "title": "List available versions",
      "topics": [
        "fetchLatestVersion",
        "listVersions"
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    },
    {
      "page": "LunSpikeInData",
      "title": "Obtain the Lun spike-in data",
      "topics": [
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    {
      "page": "MacoskoRetinaData",
      "title": "Obtain the Macosko retina data",
      "topics": [
        "MacoskoRetinaData"
      ]
    },
    {
      "page": "MairPBMCData",
      "title": "Obtain the Mair CITE-seq data",
      "topics": [
        "MairPBMCData"
      ]
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    {
      "page": "MarquesBrainData",
      "title": "Obtain the Marques brain data",
      "topics": [
        "MarquesBrainData"
      ]
    },
    {
      "page": "MessmerESCData",
      "title": "Obtain the Messmer ESC data",
      "topics": [
        "MessmerESCData"
      ]
    },
    {
      "page": "MuraroPancreasData",
      "title": "Obtain the Muraro pancreas data",
      "topics": [
        "MuraroPancreasData"
      ]
    },
    {
      "page": "NestorowaHSCData",
      "title": "Obtain the Nestorowa HSC data",
      "topics": [
        "NestorowaHSCData"
      ]
    },
    {
      "page": "NowakowskiCortexData",
      "title": "Obtain the Nowakowski cortex data",
      "topics": [
        "NowakowskiCortexData"
      ]
    },
    {
      "page": "PaulHSCData",
      "title": "Obtain the Paul HSC data",
      "topics": [
        "PaulHSCData"
      ]
    },
    {
      "page": "polishDataset",
      "title": "Polish dataset for saving",
      "topics": [
        "polishDataset"
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    },
    {
      "page": "PollenGliaData",
      "title": "Obtain the Pollen radial glia data",
      "topics": [
        "PollenGliaData"
      ]
    },
    {
      "page": "ReprocessedData",
      "title": "Reprocessed single-cell data sets",
      "topics": [
        "ReprocessedAllenData",
        "ReprocessedFluidigmData",
        "ReprocessedTh2Data"
      ]
    },
    {
      "page": "RichardTCellData",
      "title": "Obtain the Richard T cell data",
      "topics": [
        "RichardTCellData"
      ]
    },
    {
      "page": "RomanovBrainData",
      "title": "Obtain the Romanov brain data",
      "topics": [
        "RomanovBrainData"
      ]
    },
    {
      "page": "saveDataset",
      "title": "Save a dataset to disk",
      "topics": [
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    {
      "page": "searchDatasets",
      "title": "Search dataset metadata",
      "topics": [
        "searchDatasets"
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    {
      "page": "SegerstolpePancreasData",
      "title": "Obtain the Segerstolpe pancreas data",
      "topics": [
        "SegerstolpePancreasData"
      ]
    },
    {
      "page": "ShekharRetinaData",
      "title": "Obtain the Shekhar retina data",
      "topics": [
        "ShekharRetinaData"
      ]
    },
    {
      "page": "StoeckiusHashingData",
      "title": "Obtain the Stoeckius cell hashing data",
      "topics": [
        "StoeckiusHashingData"
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    {
      "page": "surveyDatasets",
      "title": "Survey of dataset metadata",
      "topics": [
        "surveyDatasets"
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    {
      "page": "TasicBrainData",
      "title": "Obtain the Tasic brain data",
      "topics": [
        "TasicBrainData"
      ]
    },
    {
      "page": "UsoskinBrainData",
      "title": "Obtain the Usoskin brain data",
      "topics": [
        "UsoskinBrainData"
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    {
      "page": "WuKidneyData",
      "title": "Obtain the Wu kidney data",
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        "WuKidneyData"
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    {
      "page": "XinPancreasData",
      "title": "Obtain the Xin pancreas data",
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        "XinPancreasData"
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    {
      "page": "ZeiselBrainData",
      "title": "Obtain the Zeisel brain data",
      "topics": [
        "ZeiselBrainData"
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    {
      "page": "ZeiselNervousData",
      "title": "Obtain the Zeisel nervous system data",
      "topics": [
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    {
      "page": "ZhaoImmuneLiverData",
      "title": "Obtain the Zhao immune liver data",
      "topics": [
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      ]
    },
    {
      "page": "ZhongPrefrontalData",
      "title": "Obtain the Zhong prefrontal cortex data",
      "topics": [
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      ]
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    {
      "page": "ZilionisLungData",
      "title": "Obtain the Zilionis lung cancer data",
      "topics": [
        "ZilionisLungData"
      ]
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