{ "_id": "6aca1fe6fe5cc25786e84f5d", "Package": "spatialDmelxsim", "Title": "Spatial allelic expression counts for fly cross embryo", "Version": "1.18.0", "Authors@R": "person(given = \"Michael\",\nfamily = \"Love\",\nrole = c(\"aut\", \"cre\"),\nemail = \"michaelisaiahlove@gmail.com\")", "Description": "Spatial allelic expression counts from Combs & Fraser\n(2018), compiled into a SummarizedExperiment object. This\npackage contains data of allelic expression counts of spatial\nslices of a fly embryo, a Drosophila melanogaster x Drosophila\nsimulans cross. See the CITATION file for the data source, and\nthe associated script for how the object was constructed from\npublicly available data.", "License": "GPL-3", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.1.1", "URL": "https://github.com/mikelove/spatialDmelxsim", "BugReports": "https://github.com/mikelove/spatialDmelxsim/issues", "VignetteBuilder": "knitr", "biocViews": "ExperimentHub, SequencingData, RNASeqData, ExpressionData,\nDrosophila_melanogaster_Data, GEO", "Config/pak/sysreqs": "libicu-dev libpng-dev libssl-dev zlib1g-dev", "Repository": "Bioconductor 3.23", "Date/Publication": "2026-04-28 12:35:33 UTC", "RemoteUrl": "https://github.com/bioc/spatialDmelxsim", "RemoteRef": "RELEASE_3_23", "RemoteSha": "2dbfdac030b69c584e346e6ba527eb633674df17", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-10 11:15:07 UTC", "User": "root" }, "Author": "Michael Love [aut, cre]", "Maintainer": "Michael Love ", "_user": "bioc-release", "_type": "src", "_file": "spatialDmelxsim_1.18.0.tar.gz", "_fileid": "https://r2.ropensci.org/358f1dead612ccfdaea5d9676e17bdc39f7878b65bd2a408c952321597e45bc3", "_filesize": 760326, "_sha256": "358f1dead612ccfdaea5d9676e17bdc39f7878b65bd2a408c952321597e45bc3", "_expires": "2027-01-18T11:22:13.000Z", "_created": "2026-10-10T11:15:07.000Z", "_published": "2026-10-10T11:22:14.575Z", "_buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38047543355", "_status": "success", "_host": "GitHub-Actions", "_bioccheck": { "error": 0, "warning": 0, "note": 6 }, "_upstream": "https://github.com/bioc/spatialDmelxsim", "_commit": { "id": "2dbfdac030b69c584e346e6ba527eb633674df17", "author": "lshep ", "committer": "lshep ", "message": "bump x.y.z version to even y prior to creation of RELEASE_3_23 branch\n", "time": 1777379733 }, "_maintainer": { "name": "Michael Love", "email": "michaelisaiahlove@gmail.com", "login": "mikelove", "mastodon": "@mikelove@genomic.social", "description": "Genetics & Biostatistics at UNC-Chapel Hill. R/Bioconductor developer", "uuid": 69203 }, "_distro": "resolute", "_jobs": [ { "job": 114200713979, "time": 167, "config": "bioc-checks", "r": "4.6.1", "check": "NOTE", "artifact": "11668042668" }, { "job": 114200713928, "time": 326, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11668192720" }, { "job": 114200713976, "time": 370, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11668571451" }, { "job": 114200056345, "time": 227, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11668456973" } ], "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1", "role": "Depends" }, { "package": "ExperimentHub", "role": "Depends" }, { "package": "SummarizedExperiment", "role": "Depends" }, { "package": "utils", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "BiocStyle", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 1 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.19.0", "bioc": "3.24", "repository": "data/experiment" }, { "branch": "release", "version": "1.18.0", "bioc": "3.23", "repository": "data/experiment" } ], "_topics": [ "experimenthub", "sequencingdata", "rnaseqdata", "expressiondata", "drosophila_melanogaster_data", "geo", "datapkg" ], "_stars": 0, "_contributors": [ { "user": "mikelove", "count": 14, "uuid": 69203 } ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 476, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_devurl": "https://github.com/mikelove/spatialdmelxsim", "_searchresults": 0, "_datapkg": true, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/spatialDmelxsim.html" ], "_cranurl": false, "_exports": [ "spatialDmelxsim" ], "_help": [ { "page": "spatialDmelxsim", "title": "Spatial allelic expression counts for fly cross embryo", "topics": [ "spatialDmelxsim" ] } ], "_readme": "https://github.com/bioc/spatialDmelxsim/raw/RELEASE_3_23/README.md", "_rundeps": [ "abind", "AnnotationDbi", "AnnotationHub", "askpass", "Biobase", "BiocBaseUtils", "BiocFileCache", "BiocGenerics", "BiocManager", "BiocVersion", "Biostrings", "bit", "bit64", "blob", "cachem", "cli", "cpp11", "crayon", "curl", "DBI", "dbplyr", "DelayedArray", "dplyr", "ExperimentHub", "fastmap", "filelock", "generics", "GenomicRanges", "glue", "httr", "httr2", "IRanges", "jsonlite", "KEGGREST", "lattice", "lifecycle", "magrittr", "Matrix", "MatrixGenerics", "matrixStats", "memoise", "mime", "openssl", "pillar", "pkgconfig", "png", "purrr", "R6", "rappdirs", "rlang", "RSQLite", "S4Arrays", "S4Vectors", "Seqinfo", "SparseArray", "stringi", "stringr", "SummarizedExperiment", "sys", "tibble", "tidyr", "tidyselect", "utf8", "vctrs", "withr", "XVector", "yaml" ], "_vignettes": [ { "source": "spatialDmelxsim.Rmd", "filename": "spatialDmelxsim.html", "title": "spatialDmelxsim", "author": "Michael Love", "engine": "knitr::rmarkdown", "headings": [ "Allelic counts of D melanogaster x D simulans cross", "Additional details" ], "created": "2021-06-16 05:39:37", "modified": "2021-07-01 05:41:43", "commits": 4 } ], "_score": 4, "_indexed": false, "_nocasepkg": "spatialdmelxsim", "_universes": [ "bioc-release" ], "_indexurl": "https://bioc.r-universe.dev/spatialDmelxsim", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.18.0", "date": "2026-10-10T11:19:06.000Z", "distro": "resolute", "commit": "2dbfdac030b69c584e346e6ba527eb633674df17", "fileid": "https://r2.ropensci.org/c1d14e6f6cc9fb5e29185219610607816cc761e62e2bc04e2995c9bac60a266e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38047543355" }, { "r": "4.6.1", "os": "linux", "version": "1.18.0", "date": "2026-10-10T11:19:51.000Z", "distro": "resolute", "commit": "2dbfdac030b69c584e346e6ba527eb633674df17", "fileid": "https://r2.ropensci.org/4aa06b1e180fd682fc4b2c211942772c49fb127779ed229ff0b41d7f6491cb13", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc-release/actions/runs/38047543355" } ] }