{ "_id": "6aafb3fe3d719c1f84080eeb", "Package": "supersigs", "Title": "Supervised mutational signatures", "Version": "1.20.0", "Date": "2021-12-02", "Authors@R": "c(person(given = \"Albert\", \nfamily = \"Kuo\",\nrole = c(\"aut\", \"cre\"),\nemail = \"albertkuo@jhu.edu\",\ncomment = c(\"ORCID\" = \"0000-0001-5155-0748\")),\nperson(given = \"Yifan\",\nfamily = \"Zhang\",\nrole = c(\"aut\")),\nperson(given = \"Bahman\",\nfamily = \"Afsari\",\nrole = c(\"aut\")),\nperson(given = \"Cristian\",\nfamily = \"Tomasetti\",\nrole = c(\"aut\")))", "Description": "Generate SuperSigs (supervised mutational signatures) from\nsingle nucleotide variants in the cancer genome. Functions\nincluded in the package allow the user to learn supervised\nmutational signatures from their data and apply them to new\ndata. The methodology is based on the one described in Afsari\n(2021, ELife).", "biocViews": "FeatureExtraction, Classification, Regression, Sequencing,\nWholeGenome, SomaticMutation", "BugReports": "https://github.com/TomasettiLab/supersigs/issues", "URL": "https://tomasettilab.github.io/supersigs/", "License": "GPL-3", "Encoding": "UTF-8", "LazyData": "true", "LazyDataCompression": "gzip", "RoxygenNote": "7.1.1", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "PackageStatus": "Deprecated", "Config/pak/sysreqs": "libicu-dev zlib1g-dev", "Repository": "Bioconductor 3.23", "Date/Publication": "2026-04-28 12:55:55 UTC", "RemoteUrl": "https://github.com/bioc/supersigs", "RemoteRef": "RELEASE_3_23", "RemoteSha": "589553e6b32b667080f7e3fb612c545d97dd971d", "NeedsCompilation": "no", "Packaged": { "Date": "2026-09-20 10:14:10 UTC", "User": "root" }, "Author": "Albert Kuo [aut, cre] (ORCID: ),\nYifan Zhang [aut],\nBahman Afsari [aut],\nCristian Tomasetti [aut]", "Maintainer": "Albert 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