Package: batchCorr
Type: Package
Title: Within And Between Batch Correction Of LC-MS Metabolomics Data
Version: 1.2.0
Date: 2020-05-29
Authors@R: c(
    person("Anton", "Ribbenstedt", email = "parasitetwin@gmail.com", role = c("cre"), comment = c(ORCID = "0000-0002-9985-5644")),
    person("Carl", "Brunius", email = "carl.brunius@chalmers.se", role = c("aut"), comment = c(ORCID = "0000-0003-3957-870X")),
    person("Vilhelm", "Suksi", role = c("aut")))
Description: From the perspective of metabolites as the continuation of
        the central dogma of biology, metabolomics provides the closest
        link to many phenotypes of interest. This makes metabolomics
        research promising in teasing apart the complexities of living
        systems. However, due to experimental reasons, the data
        includes non-biological variation which limits quality and
        reproducibility, especially if the data is obtained from
        several batches. The batchCorr package reduces unwanted
        variation by way of between-batch alignment, within-batch drift
        correction and between-batch normalization using batch-specific
        quality control samples and long-term reference QC samples.
        Please see the associated article for more thorough
        descriptions of algorithms.
License: GPL-2
biocViews: BiomedicalInformatics, Metabolomics, MassSpectrometry,
        BatchEffect, Normalization, QualityControl
Depends: R (>= 4.4.0), SummarizedExperiment
Imports: reshape, mclust, BiocParallel, methods
Suggests: BiocStyle, knitr, testthat
LazyData: FALSE
RoxygenNote: 7.3.2
Encoding: UTF-8
URL: https://github.com/MetaboComp/batchCorr
BugReports: https://github.com/MetaboComp/batchCorr/issues
VignetteBuilder: knitr
Config/pak/sysreqs: zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 13:05:12 UTC
RemoteUrl: https://github.com/bioc/batchCorr
RemoteRef: RELEASE_3_23
RemoteSha: 0f7b86bdda326e7df75a675fa18b76444fe6e271
NeedsCompilation: no
Packaged: 2026-11-01 17:57:19 UTC; root
Author: Anton Ribbenstedt [cre] (ORCID:
    <https://orcid.org/0000-0002-9985-5644>),
  Carl Brunius [aut] (ORCID: <https://orcid.org/0000-0003-3957-870X>),
  Vilhelm Suksi [aut]
Maintainer: Anton Ribbenstedt <parasitetwin@gmail.com>