Please cite the paper below when using casper, and the appropriate
methodology articles indicated in the help page of the functions you're
using.

  Rossell D, Stephan-Otto Attolini C, Kroiss M, Stocker A (2014).
  “Quantifying alternative splicing from paired-end RNA-seq data.”
  _Annals of Applied Statistics_, *8*(1), 309-330.

A BibTeX entry for LaTeX users is

  @Article{,
    author = {D. Rossell and C. {Stephan-Otto Attolini} and M. Kroiss and A. Stocker},
    title = {Quantifying alternative splicing from paired-end RNA-seq data},
    journal = {Annals of Applied Statistics},
    year = {2014},
    volume = {8},
    number = {1},
    pages = {309--330},
  }