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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "ccfindR" in publications use:'
type: software
license: GPL-2.0-or-later
title: 'ccfindR: Cancer Clone Finder'
version: 1.32.0
doi: 10.32614/CRAN.package.ccfindR
abstract: A collection of tools for cancer genomic data clustering analyses, including
  those for single cell RNA-seq. Cell clustering and feature gene selection analysis
  employ Bayesian (and maximum likelihood) non-negative matrix factorization (NMF)
  algorithm. Input data set consists of RNA count matrix, gene, and cell bar code
  annotations. Analysis outputs are factor matrices for multiple ranks and marginal
  likelihood values for each rank. The package includes utilities for downstream analyses,
  including meta-gene identification, visualization, and construction of rank-based
  trees for clusters.
authors:
- family-names: Woo
  given-names: Jun
  email: jwoo@umn.edu
- family-names: Wang
  given-names: Jinhua
  email: wangjh@umn.edu
repository: https://bioc-release.r-universe.dev
commit: aaa8bac2df8a0d999b01186a42f1f3c10fc0b0bd
url: http://dx.doi.org/10.26508/lsa.201900443
date-released: '2019-10-01'
contact:
- family-names: Woo
  given-names: Jun
  email: jwoo@umn.edu