Package 'chipseqDB'
| Title: |
A Bioconductor Workflow to Detect Differential Binding in
ChIP-seq Data |
| Description: |
Describes a computational workflow for performing a DB
analysis with sliding windows. The aim is to facilitate the
practical implementation of window-based DB analyses by
providing detailed code and expected output. The workflow
described here applies to any ChIP-seq experiment with multiple
experimental conditions and multiple biological samples in one
or more of the conditions. It detects and summarizes DB regions
between conditions in a de novo manner, i.e., without making
any prior assumptions about the location or width of bound
regions. Detected regions are then annotated according to their
proximity to genes. |
| Authors: |
Aaron Lun [aut, cre],
Gordon Smyth [aut] |
| Maintainer: |
Aaron Lun <[email protected]> |
| License: |
Artistic-2.0 |
| Version: |
1.36.0 |
| Built: |
2026-10-04 17:11:56 UTC |
| Source: |
https://github.com/bioc/chipseqDB |
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