Package: crisprBase
Version: 1.16.0
Date: 2025-10-27
Title: Base functions and classes for CRISPR gRNA design
Authors@R: person("Jean-Philippe", "Fortin", email = "fortin946@gmail.com", role = c("aut", "cre"))
Depends: utils, methods, R (>= 4.1)
Imports: BiocGenerics, Biostrings, GenomicRanges, graphics, IRanges,
        S4Vectors, stringr
Suggests: BiocStyle, knitr, rmarkdown, testthat
biocViews: CRISPR, FunctionalGenomics
Description: Provides S4 classes for general nucleases, CRISPR
        nucleases, CRISPR nickases, and base editors.Several
        CRISPR-specific genome arithmetic functions are implemented to
        help extract genomic coordinates of spacer and protospacer
        sequences. Commonly-used CRISPR nuclease objects are provided
        that can be readily used in other packages. Both DNA- and
        RNA-targeting nucleases are supported.
License: MIT + file LICENSE
Encoding: UTF-8
RoxygenNote: 7.3.3
VignetteBuilder: knitr
BugReports: https://github.com/crisprVerse/crisprBase/issues
URL: https://github.com/crisprVerse/crisprBase
Collate: 'AllGenerics.R' 'rebase.R' 'Nuclease-class.R'
        'Nickase-class.R' 'CrisprNuclease-class.R'
        'CrisprNickase-class.R' 'BaseEditor-class.R' 'arithmetics.R'
        'data.R' 'utils.R' 'converters.R' 'annotateMismatches.R'
LazyData: true
Config/pak/sysreqs: libicu-dev zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:57:37 UTC
RemoteUrl: https://github.com/bioc/crisprBase
RemoteRef: RELEASE_3_23
RemoteSha: 00f5ba957ff3ff7b5b69591c332dc36395d9c44f
NeedsCompilation: no
Packaged: 2026-10-10 13:12:44 UTC; root
Author: Jean-Philippe Fortin [aut, cre]
Maintainer: Jean-Philippe Fortin <fortin946@gmail.com>