Package 'csawBook'
| Title: |
The Book of csaw |
| Description: |
Describes how to use the csaw package to detect
differentially bound regions in ChIP-seq data. This provides
instructions on how to read in BAM files to obtain a per-window
count matrix, filtering to obtain high-abundance windows of
interest, normalization of sample-specific biases, testing for
differential binding, consolidation of per-window results to
obtain per-region statistics, and annotation and visualization
of the DB results. |
| Authors: |
Aaron Lun [aut, cre] |
| Maintainer: |
Aaron Lun <[email protected]> |
| License: |
GPL-3 |
| Version: |
1.20.0 |
| Built: |
2026-10-10 12:00:51 UTC |
| Source: |
https://github.com/bioc/csawBook |
Help Index