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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "curatedPCaData" in publications use:'
type: software
license: CC-BY-4.0
title: 'curatedPCaData: Curated Prostate Cancer Data'
version: 1.8.0
doi: 10.1038/s41597-023-02335-4
identifiers:
- type: doi
  value: 10.32614/CRAN.package.curatedPCaData
abstract: The package curatedPCaData offers a selection of annotated prostate cancer
  datasets featuring multiple omics, manually curated metadata, and derived downstream
  variables. The studies are offered as MultiAssayExperiment (MAE) objects via ExperimentHub,
  and comprise of clinical characteristics tied to gene expression, copy number alteration
  and somatic mutation data. Further, downstream features computed from these multi-omics
  data are offered. Multiple vignettes help grasp characteristics of the various studies
  and provide example exploratory and meta-analysis of leveraging the multiple studies
  provided here-in.
authors:
- family-names: Laajala
  given-names: Teemu Daniel
  email: teelaa@utu.fi
  orcid: https://orcid.org/0000-0002-7016-7354
preferred-citation:
  type: article
  title: A harmonized resource of integrated prostate cancer clinical, -omic, and
    signature features
  authors:
  - family-names: Laajala
    given-names: Teemu D
  - family-names: Sreekanth
    given-names: Varsha
  - family-names: Soupir
    given-names: Alex
  - family-names: Creed
    given-names: Jordan
  - family-names: Halkola
    given-names: Anni S
  - family-names: Calboli
    given-names: Federico CF
  - family-names: Singaravelu
    given-names: Kalaimathy
  - family-names: Leitzinger
    given-names: Christelle Colin
  - family-names: Gerke
    given-names: Travis
  - family-names: Fidley
    given-names: Brooke L
  - family-names: Tyekucheva
    given-names: Svitlana
  - family-names: Costello
    given-names: James C
  journal: Scientific Data
  year: '2023'
  volume: '10'
  issue: '1'
  url: https://www.nature.com/articles/s41597-023-02335-4
  doi: 10.1038/s41597-023-02335-4
repository: https://bioconductor.org/
repository-code: https://github.com/Syksy/curatedPCaData
commit: 060f061ed41209b314b703834982f03efec97037
url: https://github.com/Syksy/curatedPCaData
date-released: '2024-01-10'
contact:
- family-names: Laajala
  given-names: Teemu Daniel
  email: teelaa@utu.fi
  orcid: https://orcid.org/0000-0002-7016-7354