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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "debrowser" in publications use:'
type: software
license: GPL-3.0-only
title: 'debrowser: Interactive Differential Expresion Analysis Browser'
version: 1.40.0
doi: 10.1186/s12864-018-5362-x
identifiers:
- type: doi
  value: 10.32614/CRAN.package.debrowser
abstract: Bioinformatics platform containing interactive plots and tables for differential
  gene and region expression studies. Allows visualizing expression data much more
  deeply in an interactive and faster way. By changing the parameters, users can easily
  discover different parts of the data that like never have been done before. Manually
  creating and looking these plots takes time. With DEBrowser users can prepare plots
  without writing any code. Differential expression, PCA and clustering analysis are
  made on site and the results are shown in various plots such as scatter, bar, box,
  volcano, ma plots and Heatmaps.
authors:
- family-names: Kucukural
  given-names: Alper
  email: alper.kucukural@umassmed.edu
- family-names: Yukselen
  given-names: Onur
  email: onur.yukselen@umassmed.edu
- family-names: Garber
  given-names: Manuel
  email: manuel.garber@umassmed.edu
preferred-citation:
  type: article
  title: 'DEBrowser: Interactive Differential Expression Analysis and Visualization
    Tool for Count Data'
  authors:
  - family-names: Kucukural
    given-names: Alper
    email: alper.kucukural@umassmed.edu
  - family-names: Yukselen
    given-names: Onur
    email: onur.yukselen@umassmed.edu
  - family-names: Ozata
    given-names: Deniz M.
  - family-names: Moore
    given-names: Melissa J.
  - family-names: Garber
    given-names: Manuel
    email: manuel.garber@umassmed.edu
  year: '2019'
  volume: '20'
  journal: BMC Genomics
  doi: 10.1186/s12864-018-5362-x
  url: https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-018-5362-x
  start: '6'
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/UMMS-Biocore/debrowser/issues/new
commit: 8e9474902fcb72f53359623755b063e585aa1cf3
url: https://github.com/UMMS-Biocore/debrowser
date-released: '2020-12-07'
contact:
- family-names: Kucukural
  given-names: Alper
  email: alper.kucukural@umassmed.edu