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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "demuxSNP" in publications use:'
type: software
license: GPL-3.0-only
title: 'demuxSNP: scRNAseq demultiplexing using cell hashing and SNPs'
version: 1.10.0
doi: 10.32614/CRAN.package.demuxSNP
abstract: This package assists in demultiplexing scRNAseq data using both cell hashing
  and SNPs data. The SNP profile of each group os learned using high confidence assignments
  from the cell hashing data. Cells which cannot be assigned with high confidence
  from the cell hashing data are assigned to their most similar group based on their
  SNPs. We also provide some helper function to optimise SNP selection, create training
  data and merge SNP data into the SingleCellExperiment framework.
authors:
- family-names: Lynch
  given-names: Michael
  email: michael.lynch@ul.ie
  orcid: https://orcid.org/0000-0001-9535-6461
- family-names: Culhane
  given-names: Aedin
  email: aedin.culhane@ul.ie
  orcid: https://orcid.org/0000-0002-1395-9734
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/michaelplynch/demuxSNP
commit: 7abccd52c9614ef8faf9cc5f3da053846bdd732b
url: https://github.com/michaelplynch/demuxSNP
date-released: '2026-04-28'
contact:
- family-names: Lynch
  given-names: Michael
  email: michael.lynch@ul.ie
  orcid: https://orcid.org/0000-0001-9535-6461