Package: diffcoexp 1.32.0

Wenbin Wei

diffcoexp: Differential Co-expression Analysis

A tool for the identification of differentially coexpressed links (DCLs) and differentially coexpressed genes (DCGs). DCLs are gene pairs with significantly different correlation coefficients under two conditions. DCGs are genes with significantly more DCLs than by chance.

Authors:Wenbin Wei, Sandeep Amberkar, Winston Hide

diffcoexp_1.32.0.tar.gz
diffcoexp_1.32.0.zip(r-4.7)diffcoexp_1.32.0.zip(r-4.6)diffcoexp_1.32.0.zip(r-4.5)
diffcoexp_1.32.0.tgz(r-4.6-any)diffcoexp_1.32.0.tgz(r-4.5-any)
diffcoexp_1.32.0.tar.gz(r-4.7-any)diffcoexp_1.32.0.tar.gz(r-4.6-any)
diffcoexp_1.32.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
diffcoexp/json (API)
NEWS

# Install 'diffcoexp' in R:
install.packages('diffcoexp', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/hidelab/diffcoexp/issues

Datasets:

On BioConductor:diffcoexp-1.33.0(bioc 3.24)diffcoexp-1.32.0(bioc 3.23)

geneexpressiondifferentialexpressiontranscriptionmicroarrayonechanneltwochannelrnaseqsequencingcoverageimmunooncology

6.94 score 17 stars 37 scripts 437 downloads 2 mentions 3 exports 94 dependencies

Last updated from:0139c9e053 (on RELEASE_3_23). Checks:1 ERROR, 9 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksERROR209
linux-devel-x86_64OK346
source / vignettesOK360
linux-release-x86_64OK369
macos-release-arm64OK199
macos-oldrel-arm64OK142
windows-develOK218
windows-releaseOK219
windows-oldrelOK226
wasm-releaseOK186

Exports:coexprcomparecordiffcoexp

Dependencies:abindbackportsbase64encBiobaseBiocGenericsbslibcachemcheckmatecliclustercodetoolscolorspacecpp11data.tableDelayedArrayDiffCorrdigestdoParalleldynamicTreeCutevaluatefarverfastclusterfastmapfdrtoolfontawesomeforeachforeignFormulafsgenericsGenomicRangesggplot2glueGPArotationgridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetsigraphimputeIRangesisobanditeratorsjquerylibjsonliteknitrlabelinglatticelifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemimemnormtmulttestnlmennetpcaMethodspkgconfigpreprocessCorepsychR6rappdirsRColorBrewerRcpprlangrmarkdownrpartrstudioapiS4ArraysS4VectorsS7sassscalesSeqinfoSparseArraystringistringrSummarizedExperimentsurvivaltinytexvctrsviridisLiteWGCNAwithrxfunXVectoryaml

About diffcoexp

Rendered fromdiffcoexp.Rnwusingutils::Sweaveon May 29 2026.

Last update: 2020-11-23
Started: 2018-01-17