Package: dyebiasexamples 1.52.0

Philip Lijnzaad

dyebiasexamples: Example data for the dyebias package, which implements the GASSCO method.

Data for the dyebias package, consisting of 4 self-self hybrizations of self-spotted yeast slides, as well as data from Array Express accession E-MTAB-32

Authors:Philip Lijnzaad and Thanasis Margaritis

dyebiasexamples_1.52.0.tar.gz
dyebiasexamples_1.52.0.tar.gz(r-4.7-any)dyebiasexamples_1.52.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
dyebiasexamples/json (API)

# Install 'dyebiasexamples' in R:
install.packages('dyebiasexamples', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • data.norm - Example data for the dyebias package
  • data.raw - Example data for the dyebias package

On BioConductor:dyebiasexamples-1.53.0(data/experiment 3.24)dyebiasexamples-1.52.0(data/experiment 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

experimentdatasagedatacghdatamicroarraydatatwochanneldataarrayexpressdatapkg

2.30 score 10 scripts 2 exports 67 dependencies

Last updated from:88a2612dd6 (on RELEASE_3_23). Checks:1 ERROR, 2 WARNING, 1 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksERROR145
linux-develWARNING221
source / vignettesOK254
linux-releaseWARNING269

Exports:dyebias.geo2marraydyebias.umcu.proper.estimators

Dependencies:abindaskpassBiobaseBiocGenericsbitbit64clicliprcpp11crayoncurldata.tableDelayedArraydplyrgenericsGenomicRangesGEOquerygluehmshttrhttr2IRangesjsonlitelatticelifecyclelimmamagrittrmarrayMatrixMatrixGenericsmatrixStatsmimeopensslpillarpkgconfigprettyunitsprogresspurrrR.methodsS3R.ooR.utilsR6readrrentrezrlangrvestS4ArraysS4VectorsselectrSeqinfoSparseArraystatmodstringistringrSummarizedExperimentsystibbletidyrtidyselecttzdbutf8vctrsvroomwithrXMLxml2XVector