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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "epiNEM" in publications use:'
type: software
license: GPL-3.0-only
title: 'epiNEM: epiNEM'
version: 1.36.0
doi: 10.1371/journal.pcbi.1005496
identifiers:
- type: doi
  value: 10.32614/CRAN.package.epiNEM
abstract: epiNEM is an extension of the original Nested Effects Models (NEM). EpiNEM
  is able to take into account double knockouts and infer more complex network signalling
  pathways. It is tailored towards large scale double knock-out screens.
authors:
- family-names: Pirkl
  given-names: Martin
  email: martinpirkl@yahoo.de
- family-names: Diekmann
  given-names: Madeline
preferred-citation:
  type: article
  title: Inferring modulators of genetic interactions with epistatic nested effects
    models
  authors:
  - family-names: Pirkl
    given-names: Martin
    email: martinpirkl@yahoo.de
  - family-names: Diekmann
    given-names: Madeline
  - family-names: Wees
    given-names: Marlies
    name-particle: van der
  - family-names: Beerenwinkel
    given-names: Niko
  - family-names: Fröhlich
    given-names: Holger
  - family-names: Markowetz
    given-names: Florian
  year: '2017'
  volume: '13'
  doi: 10.1371/journal.pcbi.1005496
  journal: PLOS Computational Biology
  start: 1-18
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/cbg-ethz/epiNEM
commit: 73fc1eea401ae9e3b0f70c0cd9e83a70bf41537f
url: https://github.com/cbg-ethz/epiNEM/
date-released: '2026-04-28'
contact:
- family-names: Pirkl
  given-names: Martin
  email: martinpirkl@yahoo.de