# ------------------------------------------------
# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# ------------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "fluentGenomics" in publications use:'
type: software
license: MIT
title: 'fluentGenomics: A plyranges and tximeta workflow'
version: 1.24.0
abstract: An extended workflow using the plyranges and tximeta packages for fluent
  genomic data analysis. Use tximeta to correctly import RNA-seq transcript quantifications
  and summarize them to gene counts for downstream analysis. Use plyranges for clearly
  expressing operations over genomic coordinates and to combine results from differential
  expression and differential accessibility analyses.
authors:
- family-names: Lee
  given-names: Stuart
  email: stuart.andrew.lee@gmail.com
  orcid: https://orcid.org/0000-0003-1179-8436
- family-names: Love
  given-names: Michael
  email: michaelisaiahlove@gmail.com
repository: https://bioconductor.org/
repository-code: https://github.com/sa-lee/fluentGenomics
commit: ab4340df7cba28a1066f36d935ff28204b4fe249
url: https://github.com/sa-lee/fluentGenomics
date-released: '2026-04-28'
contact:
- family-names: Lee
  given-names: Stuart
  email: stuart.andrew.lee@gmail.com
  orcid: https://orcid.org/0000-0003-1179-8436