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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "gDNAinRNAseqData" in publications use:'
type: software
license: Artistic-2.0
title: 'gDNAinRNAseqData: RNA-seq data with different levels of gDNA contamination'
version: 1.12.0
doi: 10.1186/s12864-022-08785-1
identifiers:
- type: doi
  value: 10.32614/CRAN.package.gDNAinRNAseqData
abstract: Provides access to BAM files generated from RNA-seq data produced with different
  levels of gDNA contamination. It currently allows one to download a subset of the
  data published by Li et al., BMC Genomics, 23:554, 2022. This subset of data is
  formed by BAM files with about 100,000 alignments with three different levels of
  gDNA contamination.
authors:
- family-names: Castelo
  given-names: Robert
  email: robert.castelo@upf.edu
  orcid: https://orcid.org/0000-0003-2229-4508
preferred-citation:
  type: article
  title: Genes expressed at low levels raise false discovery rates in RNA samples
    contaminated with genomic DNA
  authors:
  - family-names: Li
    given-names: Xiangnan
  - family-names: Zhang
    given-names: Peipei
  - family-names: Yu
    given-names: Ying
  journal: BMC Genomics
  volume: '23'
  year: '2022'
  url: https://doi.org/10.1186/s12864-022-08785-1
  doi: 10.1186/s12864-022-08785-1
  start: '554'
repository: https://bioconductor.org/
repository-code: https://github.com/functionalgenomics/gDNAinRNAseqData
commit: bdcdff381f6d768ebfe39d121bd38bc5ae7a4ee4
url: https://github.com/functionalgenomics/gDNAinRNAseqData
date-released: '2026-04-28'
contact:
- family-names: Castelo
  given-names: Robert
  email: robert.castelo@upf.edu
  orcid: https://orcid.org/0000-0003-2229-4508