Package: globalSeq 1.40.0

Armin Rauschenberger

globalSeq: Global Test for Counts

The method may be conceptualised as a test of overall significance in regression analysis, where the response variable is overdispersed and the number of explanatory variables exceeds the sample size. Useful for testing for association between RNA-Seq and high-dimensional data.

Authors:Armin Rauschenberger [aut, cre]

globalSeq_1.40.0.tar.gz
globalSeq_1.40.0.zip(r-4.7-any)globalSeq_1.40.0.zip(r-4.6-any)globalSeq_1.40.0.zip(r-4.5-any)
globalSeq_1.40.0.tgz(r-4.6-any)globalSeq_1.40.0.tgz(r-4.5-any)
globalSeq_1.40.0.tar.gz(r-4.7-any)globalSeq_1.40.0.tar.gz(r-4.6-any)
globalSeq_1.40.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
globalSeq/json (API)

# Install 'globalSeq' in R:
install.packages('globalSeq', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rauschenberger/globalseq/issues

On BioConductor:globalSeq-1.41.0(bioc 3.24)globalSeq-1.40.0(bioc 3.23)

geneexpressionexonarraydifferentialexpressiongenomewideassociationtranscriptomicsdimensionreductionregressionsequencingwholegenomernaseqexomeseqmirnamultiplecomparison

5.32 score 1 stars 4 scripts 15 exports 0 dependencies

Last updated from:8823d24638 (on RELEASE_3_23). Checks:1 WARNING, 9 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksWARNING161
linux-devel-x86_64OK204
source / vignettesOK166
linux-release-x86_64OK149
macos-release-arm64OK112
macos-oldrel-arm64OK113
windows-develOK91
windows-releaseOK78
windows-oldrelOK77
wasm-releaseOK98

Exports:cursusintern.chromointern.convaintern.covintern.crudeintern.estimintern.focusintern.matrixintern.permuintern.plotintern.samintern.scoreintern.selectomnibusproprius

Dependencies:

article frame
output: rmarkdown::html_vignettepagetitle: articlevignette: >%\VignetteIndexEntry

Last update: 2020-03-02
Started: 2017-04-12

vignette frame
output: rmarkdown::html_vignettepagetitle: vignettevignette: >%\VignetteIndexEntry

Last update: 2020-03-02
Started: 2017-04-12

vignette source
Initialisation | Test of association | Decomposition | Genome-wide analysis

Last update: 2019-01-29
Started: 2015-11-13