Package: gwasurvivr 1.30.0

Abbas Rizvi

gwasurvivr: gwasurvivr: an R package for genome wide survival analysis

gwasurvivr is a package to perform survival analysis using Cox proportional hazard models on imputed genetic data.

Authors:Abbas Rizvi, Ezgi Karaesmen, Martin Morgan, Lara Sucheston-Campbell

gwasurvivr_1.30.0.tar.gz
gwasurvivr_1.30.0.zip(r-4.7)gwasurvivr_1.30.0.zip(r-4.6)gwasurvivr_1.30.0.zip(r-4.5)
gwasurvivr_1.30.0.tgz(r-4.6-any)gwasurvivr_1.30.0.tgz(r-4.5-any)
gwasurvivr_1.30.0.tar.gz(r-4.7-any)gwasurvivr_1.30.0.tar.gz(r-4.6-any)
gwasurvivr_1.30.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
gwasurvivr/json (API)
NEWS

# Install 'gwasurvivr' in R:
install.packages('gwasurvivr', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/suchestoncampbelllab/gwasurvivr/issues

On BioConductor:gwasurvivr-1.31.0(bioc 3.24)gwasurvivr-1.30.0(bioc 3.23)

genomewideassociationsurvivalregressiongeneticssnpgeneticvariabilitypharmacogenomicsbiomedicalinformatics

6.48 score 13 stars 77 scripts 384 downloads 1 mentions 5 exports 133 dependencies

Last updated from:63578a1949 (on RELEASE_3_23). Checks:1 ERROR, 9 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksERROR300
linux-devel-x86_64OK525
source / vignettesOK377
linux-release-x86_64OK460
macos-release-arm64OK305
macos-oldrel-arm64OK297
windows-develOK441
windows-releaseOK434
windows-oldrelOK381
wasm-releaseOK176

Exports:gdsCoxSurvimpute2CoxSurvmichiganCoxSurvplinkCoxSurvsangerCoxSurv

Dependencies:abindAnnotationDbiaskpassbackportsBHBiobaseBiocGenericsBiocIOBiocParallelBiostringsbitbit64bitopsblobbootbroomBSgenomecachemcigarilloclicliprcodetoolscpp11crayoncurldata.tableDBIDelayedArrayDNAcopydplyrfastmapforcatsforeachformatRformula.toolsfutile.loggerfutile.optionsgdsfmtgenericsGenomicAlignmentsGenomicFeaturesGenomicRangesglmnetglueGWASExactHWGWASToolshavenhmshttrIRangesiteratorsjomojsonliteKEGGRESTlambda.rlatticelifecyclelme4lmtestlogistfmagrittrMASSMatrixMatrixGenericsMatrixModelsmatrixStatsmemoisemgcvmicemimeminqamitmlnlmenloptrnnetnumDerivopenssloperator.toolsordinalpanpillarpkgconfigpngprettyunitsprogresspurrrquantregquantsmoothR6rbibutilsRcppRcppEigenRCurlRdpackreadrreformulasrestfulrRhpcBLASctlRhtslibrjsonrlangrpartRsamtoolsRSQLitertracklayerS4ArraysS4VectorssandwichSeqinfoshapesnowSNPRelateSparseArraySparseMstringistringrSummarizedExperimentsurvivalsystibbletidyrtidyselecttzdbucminfutf8VariantAnnotationvctrsvroomwithrXMLXVectoryamlzoo

gwasurvivr Vignette

Abbas Rizvi, Ezgi Karaesmen, Martin Morgan, Lara Sucheston-Campbell

Rendered fromgwasurvivr_Introduction.Rmdusingknitr::rmarkdownon May 29 2026.

Last update: 2018-10-04
Started: 2018-05-17