Package: hgu2beta7 1.52.0

Bioconductor Package Maintainer

hgu2beta7: A data package containing annotation data for hgu2beta7

Annotation data file for hgu2beta7 assembled using data from public data repositories

Authors:Chenwei Lin

hgu2beta7_1.52.0.tar.gz
hgu2beta7_1.52.0.tar.gz(r-4.7-any)hgu2beta7_1.52.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
hgu2beta7/json (API)

# Install 'hgu2beta7' in R:
install.packages('hgu2beta7', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • hgu2beta7ACCNUM - Mappings between probe identifiers and manufacturer or user provided identifiers
  • hgu2beta7CHR - Mappings between probe identifiers and the chromosome numbers the genes represented by the probe ids reside
  • hgu2beta7CHRLENGTHS - A named vector for the length of each of the chromosomes
  • hgu2beta7CHRLOC - Mappings between probe identifiers and the chromosomal locations of the genes represented by the probe identifiers
  • hgu2beta7ENZYME - Mappings between probe identifiers and the enzyme commission numbers, to which the products of the genes represented by the probe ids correspond
  • hgu2beta7ENZYME2PROBE - Mappings between Enzyme Commission numbers and probe identifiers
  • hgu2beta7GENENAME - Mappings between probe identifiers and the names of genes the probe ids correspond to
  • hgu2beta7GO - Mappings between probe identifiers and Gene Ontology information
  • hgu2beta7GO2ALLPROBES - Mappings between GO identifiers and all the probe idifiers representing genes associated with the GO ids
  • hgu2beta7GO2PROBE - Mappings between GO identifiers and probe identifiers representing genes that are directly associated with the GO ids
  • hgu2beta7GRIF - Mappings between probe identifiers and the PubMed identifiers for the publication where functional annotation of genes corresponding to the probe ids were made
  • hgu2beta7LOCUSID - Mappings between probe identifiers and LocusLink identifiers
  • hgu2beta7MAP - Mappings between probe identifiers and cytogenetic maps/bands
  • hgu2beta7MAPCOUNTS - Quality control information for hgu2beta7
  • hgu2beta7OMIM - Mappings between probe identifiers and Mendelian Inheritance in Man (MIM) identifiers
  • hgu2beta7ORGANISM - A character string for the name of the organism
  • hgu2beta7PATH - Mappings between probe identifiers and KEGG pathway identifiers
  • hgu2beta7PATH2PROBE - Mappings between KEGG pathway identifiers and probe identifiers
  • hgu2beta7PMID - Mappings between probe identifiers and PubMed identifiers
  • hgu2beta7PMID2PROBE - Mappings between PubMed identifiers and probe identifiers
  • hgu2beta7QC - Quality control information for hgu2beta7
  • hgu2beta7REFSEQ - Mappings between probe identifiers and RefSeq identifiers
  • hgu2beta7SUMFUNC - Mappings between probe identifiers and summaries of the functions of genes represented by the probe identifiers
  • hgu2beta7SYMBOL - Mappings between probe identifiers and gene symbols
  • hgu2beta7UNIGENE - Mappings between probe identifiers and UniGene cluster identifiers

On BioConductor:hgu2beta7-1.53.0(data/experiment 3.24)hgu2beta7-1.52.0(data/experiment 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

genomedatapkg

2.30 score 3 scripts 2 exports 0 dependencies

Last updated from:cd94e8caeb (on RELEASE_3_23). Checks:1 ERROR, 2 WARNING, 1 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksERROR112
linux-develWARNING134
source / vignettesOK125
linux-releaseWARNING165

Exports:.no_S3_genericshgu2beta7

Dependencies:

Readme and manuals

Help Manual

Help pageTopics
Bioconductor annotation data packagehgu2beta7
Mappings between probe identifiers and manufacturer or user provided identifiershgu2beta7ACCNUM
Mappings between probe identifiers and the chromosome numbers the genes represented by the probe ids residehgu2beta7CHR
A named vector for the length of each of the chromosomeshgu2beta7CHRLENGTHS
Mappings between probe identifiers and the chromosomal locations of the genes represented by the probe identifiershgu2beta7CHRLOC
Mappings between probe identifiers and the enzyme commission numbers, to which the products of the genes represented by the probe ids correspondhgu2beta7ENZYME
Mappings between Enzyme Commission numbers and probe identifiershgu2beta7ENZYME2PROBE
Mappings between probe identifiers and the names of genes the probe ids correspond tohgu2beta7GENENAME
Mappings between probe identifiers and Gene Ontology informationhgu2beta7GO
Mappings between GO identifiers and all the probe idifiers representing genes associated with the GO idshgu2beta7GO2ALLPROBES
Mappings between GO identifiers and probe identifiers representing genes that are directly associated with the GO idshgu2beta7GO2PROBE
Mappings between probe identifiers and the PubMed identifiers for the publication where functional annotation of genes corresponding to the probe ids were madehgu2beta7GRIF
Mappings between probe identifiers and LocusLink identifiershgu2beta7LOCUSID
Mappings between probe identifiers and cytogenetic maps/bandshgu2beta7MAP
Mappings between probe identifiers and Mendelian Inheritance in Man (MIM) identifiershgu2beta7OMIM
A character string for the name of the organismhgu2beta7ORGANISM
Mappings between probe identifiers and KEGG pathway identifiershgu2beta7PATH
Mappings between KEGG pathway identifiers and probe identifiershgu2beta7PATH2PROBE
Mappings between probe identifiers and PubMed identifiershgu2beta7PMID
Mappings between PubMed identifiers and probe identifiershgu2beta7PMID2PROBE
Quality control information for hgu2beta7hgu2beta7MAPCOUNTS hgu2beta7QC
Mappings between probe identifiers and RefSeq identifiershgu2beta7REFSEQ
Mappings between probe identifiers and summaries of the functions of genes represented by the probe identifiershgu2beta7SUMFUNC
Mappings between probe identifiers and gene symbolshgu2beta7SYMBOL
Mappings between probe identifiers and UniGene cluster identifiershgu2beta7UNIGENE