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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "hipathia" in publications use:'
type: software
license: GPL-2.0-only
title: 'hipathia: HiPathia: High-throughput Pathway Analysis'
version: 3.12.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.hipathia
abstract: Hipathia is a method for the computation of signal transduction along signaling
  pathways from transcriptomic data. The method is based on an iterative algorithm
  which is able to compute the signal intensity passing through the nodes of a network
  by taking into account the level of expression of each gene and the intensity of
  the signal arriving to it. It also provides a new approach to functional analysis
  allowing to compute the signal arriving to the functions annotated to each pathway.
authors:
- family-names: Hidalgo
  given-names: Marta R.
  email: marta.hidalgo@outlook.es
preferred-citation:
  type: article
  title: High throughput estimation of functional cell activities reveals disease
    mechanisms and predicts relevant clinical outcomes
  authors:
  - family-names: Hidalgo
    given-names: Marta R.
    email: marta.hidalgo@outlook.es
  - family-names: Çubuk
    given-names: Cankut
  - family-names: Amadoz
    given-names: Alicia
  - family-names: Salavert
    given-names: Francisco
  - family-names: Carbonell-Caballero
    given-names: José
  - family-names: Dopazo
    given-names: Joaquín
  journal: Oncotarget
  editors:
  - family-names: Blagosklonny
    given-names: M.
  - family-names: Gudkov
    given-names: A.V.
  issue: '8'
  volume: '3'
  publisher:
    name: Impact Journals
  year: '2017'
  start: '5160'
  end: '5178'
repository: https://bioc-release.r-universe.dev
commit: b306042fb880c108e0b901f96c3a50aac2343f87
date-released: '2026-04-28'
contact:
- family-names: Hidalgo
  given-names: Marta R.
  email: marta.hidalgo@outlook.es