Introduction | The HPA project | HPA data usage policy | Installation | The r Biocpkg("hpar") package | Data sets | HPA interface | HPA release information | A small use case | Session information
Package: hpar 1.54.0
Laurent Gatto
hpar: Human Protein Atlas in R
The hpar package provides a simple R interface to and data from the Human Protein Atlas project.
Authors:
hpar_1.54.0.tar.gz
hpar_1.54.0.zip(r-4.7-any)hpar_1.54.0.zip(r-4.6-any)hpar_1.54.0.zip(r-4.5-any)
hpar_1.54.0.tgz(r-4.6-any)hpar_1.54.0.tgz(r-4.5-any)
hpar_1.54.0.tar.gz(r-4.7-any)hpar_1.54.0.tar.gz(r-4.6-any)
hpar_1.54.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
hpar/json (API)
| # Install 'hpar' in R: |
| install.packages('hpar', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:hpar-1.55.0(bioc 3.24)hpar-1.54.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
proteomicscellbiologydataimportfunctionalgenomicssystemsbiologyexperimenthubsoftware
Last updated from:d3279d5783 (on RELEASE_3_23). Checks:1 ERROR, 9 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 268 | ||
| linux-devel-x86_64 | OK | 289 | ||
| source / vignettes | OK | 294 | ||
| linux-release-x86_64 | OK | 361 | ||
| macos-release-arm64 | OK | 213 | ||
| macos-oldrel-arm64 | OK | 145 | ||
| windows-devel | OK | 130 | ||
| windows-release | OK | 164 | ||
| windows-oldrel | OK | 172 | ||
| wasm-release | OK | 169 |
Exports:allHparDatabrowseHPAgetHpaDategetHpaEnsemblgetHpaVersionhpaCancerhpaCancer16.1hpaNormalTissuehpaNormalTissue16.1hpaSecretomehpaSubcellularLochpaSubcellularLoc14hpaSubcellularLoc16.1rnaConsensusTissuernaFantomTissuernaGeneCellLinernaGeneCellLine16.1rnaGeneTissue21.0rnaGtexTissuernaHpaTissue
Dependencies:AnnotationDbiAnnotationHubaskpassBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdplyrExperimentHubfastmapfilelockgenericsgluehttrhttr2IRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigpngpurrrR6rappdirsrlangRSQLiteS4VectorsSeqinfostringistringrsystibbletidyrtidyselectutf8vctrswithrXVectoryaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Browser the HPA page for a gene. | browseHPA |
| Obtain HPA data release information | allHparData getHpaDate getHpaEnsembl getHpaVersion |
