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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "humanHippocampus2024" in publications use:'
type: software
license: Artistic-2.0
title: 'humanHippocampus2024: Access to SRT and snRNA-seq data from spatial_HPC project'
version: 1.4.0
doi: 10.18129/B9.bioc.humanHippocampus2024
identifiers:
- type: doi
  value: 10.32614/CRAN.package.humanHippocampus2024
- type: url
  value: https://christinehou11.github.io/humanHippocampus2024/
abstract: This is an ExperimentHub Data package that helps to access the spatially-resolved
  transcriptomics and single-nucleus RNA sequencing data. The datasets are generated
  from adjacent tissue sections of the anterior human hippocampus across ten adult
  neurotypical donors. The datasets are based on [spatial_hpc](https://github.com/LieberInstitute/spatial_hpc)
  project by Lieber Institute for Brain Development (LIBD) researchers and collaborators.
authors:
- family-names: Hou
  given-names: Christine
  email: chris2018hou@gmail.com
  orcid: https://orcid.org/0009-0001-5350-0629
preferred-citation:
  type: manual
  title: Access to spatial HPC project data
  authors:
  - family-names: Hou
    given-names: Christine
    email: chris2018hou@gmail.com
    orcid: https://orcid.org/0009-0001-5350-0629
  year: '2026'
  url: http://www.bioconductor.org/packages/humanHippocampus2024
  notes: https://github.com/christinehou11/humanHippocampus2024/humanHippocampus2024
    - R package version 1.4.0
  doi: 10.18129/B9.bioc.humanHippocampus2024
repository: https://bioconductor.org/
repository-code: https://github.com/LieberInstitute/spatial_hpc
commit: 65358729934d4417a79e0dbd279cd04c4950e54f
url: https://support.bioconductor.org/t/humanHippocampus2024
date-released: '2024-09-20'
contact:
- family-names: Hou
  given-names: Christine
  email: chris2018hou@gmail.com
  orcid: https://orcid.org/0009-0001-5350-0629
references:
- type: article
  title: An integrated single-nucleus and spatial transcriptomics atlas reveals the
    molecular landscape of the human hippocampus
  authors:
  - family-names: Thompson
    given-names: Jacqueline R.
  - family-names: Nelson
    given-names: Erik D.
  - family-names: Tippani
    given-names: Madhavi
  - family-names: Ramnauth
    given-names: Anthony D.
  - family-names: Divecha
    given-names: Heena R.
  - family-names: Miller
    given-names: Ryan A.
  - family-names: Eagles
    given-names: Nicholas J.
  - family-names: Pattie
    given-names: Elizabeth A.
  - family-names: Kwon
    given-names: Sang Ho
  - family-names: Bach
    given-names: Svitlana V.
  - family-names: Kaipa
    given-names: Uma M.
  - family-names: Yao
    given-names: Jianing
  - family-names: Hou
    given-names: Christine
  - family-names: Kleinman
    given-names: Joel E.
  - family-names: Collado-Torres
    given-names: Leonardo
  - family-names: Han
    given-names: Shizhong
  - family-names: Maynard
    given-names: Kristen R.
  - family-names: Hyde
    given-names: Thomas M.
  - family-names: Martinowich
    given-names: Keri
  - family-names: Page
    given-names: Stephanie C.
  - family-names: Hicks
    given-names: Stephanie C.
  year: '2026'
  journal: bioRxiv
  doi: 10.1101/2024.04.26.590643
  url: https://www.biorxiv.org/content/10.1101/2024.04.26.590643v1