Package: iModMixData 1.2.0

Isis Narvaez-Bandera

iModMixData: Data for iModMix Package

Provides example datasets for the iModMix package, including gene, protein, and metabolite partial correlation matrices derived from ccRCC4 and FloresData_K_TK studies. The data are preprocessed and ready to use for testing, demonstrating iModMix workflows, and exploring correlation networks.

Authors:Isis Narvaez-Bandera [aut, cre]

iModMixData_1.2.0.tar.gz
iModMixData_1.2.0.tar.gz(r-4.7-any)iModMixData_1.2.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
iModMixData/json (API)

# Install 'iModMixData' in R:

install.packages('iModMixData', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/biodatalab/imodmixdata/issues

On BioConductor:iModMixData-1.3.1(data/experiment 3.24)iModMixData-1.2.0(data/experiment 3.23)

experimentdata expressiondata massspectrometrydata experimenthub datapkg

4.48 score 1 packages 4 scripts 3 exports 57 dependencies

Last updated from:1703f7aa6e (on RELEASE_3_23). Checks:1 NOTE, 3 OK. Indexed: no.

This is a data package. Data packages may be large and do not get checked across all platforms.

Target	Result	Time
bioc-checks	NOTE	135
linux-devel	OK	312
source / vignettes	OK	390
linux-release	OK	308

Exports:loadPartialCorGenes loadPartialCorMetabolites loadPartialCorProt

Dependencies:AnnotationDbi AnnotationHub askpass Biobase BiocBaseUtils BiocFileCache BiocGenerics BiocManager BiocVersion Biostrings bit bit64 blob cachem cli cpp11 crayon curl DBI dbplyr dplyr ExperimentHub fastmap filelock generics glue httr httr2 IRanges jsonlite KEGGREST lifecycle magrittr memoise mime openssl pillar pkgconfig png purrr R6 rappdirs rlang RSQLite S4Vectors Seqinfo stringi stringr sys tibble tidyr tidyselect utf8 vctrs withr XVector yaml

Using iModMixData

Rendered fromiModMixData.Rmdusingknitr::rmarkdown

Last update: 2025-08-25
Started: 2025-05-16

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Load PartialCorGenes data	loadPartialCorGenes
Load PartialCorMetabolites data	loadPartialCorMetabolites
Load PartialCorProt data	loadPartialCorProt