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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "idr2d" in publications use:'
type: software
license: MIT
title: 'idr2d: Irreproducible Discovery Rate for Genomic Interactions Data'
version: 1.26.0
doi: 10.1093/nar/gkaa030
identifiers:
- type: doi
  value: 10.32614/CRAN.package.idr2d
abstract: A tool to measure reproducibility between genomic experiments that produce
  two-dimensional peaks (interactions between peaks), such as ChIA-PET, HiChIP, and
  HiC. idr2d is an extension of the original idr package, which is intended for (one-dimensional)
  ChIP-seq peaks.
authors:
- family-names: Krismer
  given-names: Konstantin
  email: krismer@mit.edu
  orcid: https://orcid.org/0000-0001-8994-3416
preferred-citation:
  type: article
  title: IDR2D identifies reproducible genomic interactions
  authors:
  - family-names: Krismer
    given-names: Konstantin
    email: krismer@mit.edu
    orcid: https://orcid.org/0000-0001-8994-3416
  - family-names: Guo
    given-names: Yuchun
  - family-names: Gifford
    given-names: David K.
  journal: Nucleic Acids Research
  volume: '48'
  issue: '6'
  year: '2020'
  month: '2'
  doi: 10.1093/nar/gkaa030
  url: https://doi.org/10.1093/nar/gkaa030
  start: e31-e31
repository: https://bioc-release.r-universe.dev
commit: 22eae8a26623a46761b6a15115ddae09a50dc7f6
url: https://idr2d.mit.edu
date-released: '2026-04-28'
contact:
- family-names: Krismer
  given-names: Konstantin
  email: krismer@mit.edu
  orcid: https://orcid.org/0000-0001-8994-3416