Package: intansv 1.52.0

Wen Yao

intansv: Integrative analysis of structural variations

This package provides efficient tools to read and integrate structural variations predicted by popular softwares. Annotation and visulation of structural variations are also implemented in the package.

Authors:Wen Yao <[email protected]>

intansv_1.52.0.tar.gz
intansv_1.52.0.zip(r-4.7)intansv_1.52.0.zip(r-4.6)intansv_1.52.0.zip(r-4.5)
intansv_1.52.0.tgz(r-4.6-any)intansv_1.52.0.tgz(r-4.5-any)
intansv_1.52.0.tar.gz(r-4.7-any)intansv_1.52.0.tar.gz(r-4.6-any)
intansv_1.52.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
intansv/json (API)
NEWS

# Install 'intansv' in R:
install.packages('intansv', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:intansv-1.53.0(bioc 3.24)intansv-1.52.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

geneticsannotationsequencingsoftware

4.48 score 3 scripts 476 downloads 3 mentions 11 exports 126 dependencies

Last updated from:06d2e2489f (on RELEASE_3_23). Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksERROR217
linux-devel-x86_64NOTE455
source / vignettesOK332
linux-release-x86_64NOTE518
macos-release-arm64NOTE359
macos-oldrel-arm64NOTE330
windows-develNOTE373
windows-releaseNOTE382
windows-oldrelNOTE440
wasm-releaseOK181

Exports:methodsMergeplotChromosomeplotRegionreadBreakDancerreadCnvnatorreadDellyreadLumpyreadPindelreadSoftSearchreadSvseqsvAnnotation

Dependencies:abindAnnotationDbiAnnotationFilteraskpassbackportsbase64encBHBiobaseBiocGenericsBiocIOBiocManagerBiocParallelBiostringsbiovizBasebitbit64bitopsblobBSgenomebslibcachemcheckmatecigarillocliclustercodetoolscolorspacecpp11crayoncurldata.tableDBIDelayedArraydichromatdigestensembldbevaluatefarverfastmapfontawesomeforeignformatRFormulafsfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomicAlignmentsGenomicFeaturesGenomicRangesggbioggplot2gluegraphgridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetshttrIRangesisobandjquerylibjsonliteKEGGRESTknitrlabelinglambda.rlatticelazyevallifecyclemagrittrMatrixMatrixGenericsmatrixStatsmemoisemimennetopensslOrganismDbipkgconfigplyrpngProtGenericsR6rappdirsRBGLRColorBrewerRcppRCurlreshape2restfulrRhtslibrjsonrlangrmarkdownrpartRsamtoolsRSQLiterstudioapirtracklayerS4ArraysS4VectorsS7sassscalesSeqinfosnowSparseArraystringistringrSummarizedExperimentsystinytexUCSC.utilsVariantAnnotationvctrsviridisLitewithrxfunXMLXVectoryaml

An Introduction to intansv

Rendered fromintansvOverview.Rnwusingutils::Sweaveon May 29 2026.

Last update: 2020-04-14
Started: 2017-07-28